Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq7856 123 4e-23 seq4162 105 1e-17 seq3638 105 1e-17 >seq7856 Length=18030 Score = 123 bits (136), Expect = 4e-23 Identities = 141/189 (75%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || ||||||||||| || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 6667 ATCTTCCAATTGTTTTCCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATTCCTTCCTT 6608 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| ||||| | ||| | |||| |||||| || |||| ||| || || | || || Sbjct 6607 GTCTTGAATTTTAGCTTTGACATTTTCAATAGTGTCAGAAGCCTCTACCTCCAAGGTAAT 6548 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA---TTAGTAAAATAATTATT 193381 |||||||| || || || || ||||| || |||||| || || | ||| ||| | Sbjct 6547 GGTTTTACCCGTCAGTGTCTTCACAAAGATCTGCATTGTAAGTTTTCTGAAAAAATAAAA 6488 Query 193382 TTAAATAAT 193390 ||||| ||| Sbjct 6487 TTAAAAAAT 6479 >seq4162 Length=60589 Score = 105 bits (116), Expect = 1e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || ||||| | ||| | || | |||||| || ||||||||||| || ||||| Sbjct 57438 CGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGACAAGGTTCTTCCG 57497 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || || || || | | ||| || || ||||| ||||| || || Sbjct 57498 TCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATTCCCTCCTTG 57557 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| ||| | |||| || || || || | || || |||| |||||| Sbjct 57558 TCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCACCTCTAAAGTTATG 57617 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| ||||| || || || || || || |||||||| Sbjct 57618 GTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 57655 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | |||| || | ||| | ||||| || || ||||| Sbjct 56967 ATACCACCACGAAGACGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCC 57026 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||||| ||| || | || || || || || || | || ||| || || || Sbjct 57027 GAAAGAGTTCTACCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGT 57086 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| || || || |||| || | || || || ||||||| || Sbjct 57087 GGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCG 57146 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || ||||| || || || ||||| || || |||||||| Sbjct 57147 ACTTCCAGGGTGATGGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCAT 57196 >seq3638 Length=67878 Score = 105 bits (116), Expect = 1e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || ||||| | ||| | || | |||||| || ||||||||||| || ||||| Sbjct 12089 CGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGACAAGGTTCTTCCG 12148 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || || || || | | ||| || || ||||| ||||| || || Sbjct 12149 TCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATTCCCTCCTTG 12208 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| ||| | |||| || || || || | || || |||| |||||| Sbjct 12209 TCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCACCTCTAAAGTTATG 12268 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| ||||| || || || || || || |||||||| Sbjct 12269 GTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 12306 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || ||||||||||| | ||||| ||| || | ||||| || || || || | | | Sbjct 11069 ATGTTATAGTCGGAGAGAGTTCTTCCATCCTCGAGCTGTTTACCCGCGAAGATAAGACGC 11128 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || ||||| ||||| ||||| || || || || | || | || || ||| Sbjct 11129 TGTTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTA 11188 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || |||| ||||||||| || || || |||||||| || || || || || || || ||| Sbjct 11189 TCTGAAGCCTCAACTTCGAGGGTGATGGTTTTACCAGTCAGAGTCTTGACGAAGATCTGC 11248 Query 193359 AT 193360 || Sbjct 11249 AT 11250 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | |||| || | ||| | ||||| || || ||||| Sbjct 11618 ATACCACCACGAAGACGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCC 11677 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||||| ||| || | || || || || || || | || ||| || || || Sbjct 11678 GAAAGAGTTCTACCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGT 11737 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| || || || |||| || | || || || ||||||| || Sbjct 11738 GGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCG 11797 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || ||||| || || || ||||| || || |||||||| Sbjct 11798 ACTTCCAGGGTGATGGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCAT 11847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899551434553920