Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq3062 179 5e-40 seq4162 87.8 3e-12 seq3638 87.8 3e-12 >seq3062 Length=42157 Score = 179 bits (198), Expect = 5e-40 Identities = 288/412 (70%), Gaps = 12/412 (3%) Strand=Plus/Minus Query 18180 CTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCtttttt 18239 |||| || | |||||||||||| || || ||||| | || ||||| | ||||| |||| Sbjct 34300 CTTCGTCACGGGATATTAATTCATTGCTGAACGTCAGTCCAGGCATAAGCCCTCTCTTTT 34241 Query 18240 ttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAACGCACGCGAACG 18299 | | ||| ||||| || |||||||| | ||||| ||||| || || || || | Sbjct 34240 TCAACCAGAATATAGAGGCGAAACTTCCGCTGAAGAAAATACCTTCGACAGCTGCAAAAG 34181 Query 18300 CTATTAATCTTTCAGCAAAACTGTATTT---ATTGCTCAGTATCCATTTTTGTGCCCATT 18356 |||||| ||||||||||||| | ||| ||| || |||||| ||| |||||| | Sbjct 34180 CTATTACTCTTTCAGCAAAAGTCGCTTTGTCATTACT---TATCCAATTTAATGCCCACT 34124 Query 18357 CTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCTTTTTCTT 18416 | ||| | ||| || | | |||| || ||||| |||| | || ||||| Sbjct 34123 CAGCTTTCTTAGCAACACATGGAAGAGTCTCGATCGCATTGAACAGGTACTCGCGTTCTT 34064 Query 18417 TGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCA 18476 || || ||||| || || || || | |||||||||||||||||| || | |||| | Sbjct 34063 TGTCATTCTTTATGTAGGTATCAATGAGCAAAGAATACATTTCAGAGTGAACATTTTCAA 34004 Query 18477 TAGCTATCTGAAAACTATAAAACGATCTAGCCTCGG-GATATTGAAT--CTCGCTATAAA 18533 | ||||| ||||||| || || | | ||| |||| || | | | || ||| | Sbjct 34003 TTGCTATTTGAAAACCGTAGAAACAACGAGCTTCGGTGACCTGCACTTCCTGGCT---GA 33947 Query 18534 ATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGC 18585 ||||||| || | ||| ||||| |||||||| |||| || |||||||| || Sbjct 33946 ATCTTTCCACAAGATTTTCATTTACTATACCATCAGAAGCCGCGAAAAAGGC 33895 >seq4162 Length=60589 Score = 87.8 bits (96), Expect = 3e-12 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| |||| |||||||| || || | |||||||||| ||| Sbjct 57196 ATGCAAATTTTCGTCAAAACTCTGACGGGAAAAACCATCACCCTGGAAGTCGAAGCTTCC 57137 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || || || || || |||||||| || || ||||| || Sbjct 57136 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 57077 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | || ||||||||||| || ||| |||||| | || || || | Sbjct 57076 CAGCGACTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTAGAACTCTTTCGGACTACA-- 57019 Query 156003 ATATCCAAAGAG 156014 | ||||||| || Sbjct 57018 ACATCCAAAAAG 57007 >seq3638 Length=67878 Score = 87.8 bits (96), Expect = 3e-12 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| |||| |||||||| || || | |||||||||| ||| Sbjct 11847 ATGCAAATTTTCGTCAAAACTCTGACGGGAAAAACCATCACCCTGGAAGTCGAAGCTTCC 11788 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||| || || || || || |||||||| || || ||||| || Sbjct 11787 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 11728 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | || ||||||||||| || ||| |||||| | || || || | Sbjct 11727 CAGCGACTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTAGAACTCTTTCGGACTACA-- 11670 Query 156003 ATATCCAAAGAG 156014 | ||||||| || Sbjct 11669 ACATCCAAAAAG 11658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731788237249600