Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18]
9,156 sequences; 186,103,588 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq3062 179 5e-40
seq4162 87.8 3e-12
seq3638 87.8 3e-12
>seq3062
Length=42157
Score = 179 bits (198), Expect = 5e-40
Identities = 288/412 (70%), Gaps = 12/412 (3%)
Strand=Plus/Minus
Query 18180 CTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCtttttt 18239
|||| || | |||||||||||| || || ||||| | || ||||| | ||||| ||||
Sbjct 34300 CTTCGTCACGGGATATTAATTCATTGCTGAACGTCAGTCCAGGCATAAGCCCTCTCTTTT 34241
Query 18240 ttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAACGCACGCGAACG 18299
| | ||| ||||| || |||||||| | ||||| ||||| || || || || |
Sbjct 34240 TCAACCAGAATATAGAGGCGAAACTTCCGCTGAAGAAAATACCTTCGACAGCTGCAAAAG 34181
Query 18300 CTATTAATCTTTCAGCAAAACTGTATTT---ATTGCTCAGTATCCATTTTTGTGCCCATT 18356
|||||| ||||||||||||| | ||| ||| || |||||| ||| |||||| |
Sbjct 34180 CTATTACTCTTTCAGCAAAAGTCGCTTTGTCATTACT---TATCCAATTTAATGCCCACT 34124
Query 18357 CTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCTTTTTCTT 18416
| ||| | ||| || | | |||| || ||||| |||| | || |||||
Sbjct 34123 CAGCTTTCTTAGCAACACATGGAAGAGTCTCGATCGCATTGAACAGGTACTCGCGTTCTT 34064
Query 18417 TGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCA 18476
|| || ||||| || || || || | |||||||||||||||||| || | |||| |
Sbjct 34063 TGTCATTCTTTATGTAGGTATCAATGAGCAAAGAATACATTTCAGAGTGAACATTTTCAA 34004
Query 18477 TAGCTATCTGAAAACTATAAAACGATCTAGCCTCGG-GATATTGAAT--CTCGCTATAAA 18533
| ||||| ||||||| || || | | ||| |||| || | | | || ||| |
Sbjct 34003 TTGCTATTTGAAAACCGTAGAAACAACGAGCTTCGGTGACCTGCACTTCCTGGCT---GA 33947
Query 18534 ATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGC 18585
||||||| || | ||| ||||| |||||||| |||| || |||||||| ||
Sbjct 33946 ATCTTTCCACAAGATTTTCATTTACTATACCATCAGAAGCCGCGAAAAAGGC 33895
>seq4162
Length=60589
Score = 87.8 bits (96), Expect = 3e-12
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| |||| |||||||| || || | |||||||||| |||
Sbjct 57196 ATGCAAATTTTCGTCAAAACTCTGACGGGAAAAACCATCACCCTGGAAGTCGAAGCTTCC 57137
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || || || || || |||||||| || || ||||| ||
Sbjct 57136 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 57077
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | || ||||||||||| || ||| |||||| | || || || |
Sbjct 57076 CAGCGACTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTAGAACTCTTTCGGACTACA-- 57019
Query 156003 ATATCCAAAGAG 156014
| ||||||| ||
Sbjct 57018 ACATCCAAAAAG 57007
>seq3638
Length=67878
Score = 87.8 bits (96), Expect = 3e-12
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | ||||| |||| |||||||| || || | |||||||||| |||
Sbjct 11847 ATGCAAATTTTCGTCAAAACTCTGACGGGAAAAACCATCACCCTGGAAGTCGAAGCTTCC 11788
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || || || || || |||||||| || || ||||| ||
Sbjct 11787 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 11728
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | || | || ||||||||||| || ||| |||||| | || || || |
Sbjct 11727 CAGCGACTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTAGAACTCTTTCGGACTACA-- 11670
Query 156003 ATATCCAAAGAG 156014
| ||||||| ||
Sbjct 11669 ACATCCAAAAAG 11658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731788237249600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |