Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3062 132 9e-26 seq7856 125 1e-23 seq4162 118 2e-21 seq3638 118 2e-21 >seq3062 Length=42157 Score = 132 bits (146), Expect = 9e-26 Identities = 312/475 (66%), Gaps = 3/475 (1%) Strand=Plus/Minus Query 49848 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 49907 ||||| | ||||| |||||||| || || || | ||| ||||| | ||||||||||| Sbjct 34298 TCGTCACGGGATATTAATTCATTGCTGAACGTCAGTCCAGGCATAAGCCCTCTCTTTTTC 34239 Query 49908 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATGCT 49967 | ||| ||||| || || ||||| | ||||| ||||| |||||| ||||| ||| Sbjct 34238 AACCAGAATATAGAGGCGAAACTTCCGCTGAAGAAAATACCTTCGACAGCTGCAAAAGCT 34179 Query 49968 ATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCCAATTTATAGCCCAATCTGCt 50027 |||| |||| | |||| | ||| |||| ||||||||||| ||||| || ||| Sbjct 34178 ATTACTCTTTCAGCAAAAGTCGCTTTGTCATTACTTATCCAATTTAATGCCCACTCAGCT 34119 Query 50028 ttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAATTCAtttttttCATNNNNN 50087 || || | | | || | | | || || || || || | | | ||| | Sbjct 34118 TTCTTAGCAACACATGGAAGAGTCTCGATCGCATTGAACAGGTACTCGCGTTCTTTGTCA 34059 Query 50088 NNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCT 50147 || | ||||||||||||||||| || ||| ||| || ||| Sbjct 34058 TTCTTTATGTAGGTATCAATGAGCAAAGAATACATTTCAGAGTGAACATTTTCAATTGCT 33999 Query 50148 ATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCA 50207 |||||||| || || | ||||| | ||| ||||| ||||| ||| Sbjct 33998 ATTTGAAAACCGTAGAAACAACGAGCTTCGGTGACCTGCACTTCCTGGCTGAATCTTTCC 33939 Query 50208 ACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATA 50267 || | ||| ||| ||| ||||||||||| || ||||| || || | || || | |||| Sbjct 33938 ACAAGATTTTCATTTACTATACCATCAGAAGCCGCGAAAAAGGCGAGAATGTGTGAAATA 33879 Query 50268 AAATGTTTTTCATTATCTTTTAAATTTTCCCAA-GATTCAAGATCGTTTGATAAA 50321 || | ||||| ||| |||| ||| ||||| ||| ||| ||| |||| |||| Sbjct 33878 AATTTACGTTCATCGTCTGTTAATTTTACCCAATGATCCAA-ATCCTTTG-TAAA 33826 >seq7856 Length=18030 Score = 125 bits (138), Expect = 1e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || ||||| | || ||| |||| ||||||||||| ||||| || || || | Sbjct 6694 GATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAATTGTTTTCCAGCGAAAATCAAACG 6635 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||| || || |||||||| || ||||| |||||| ||| ||||| |||| Sbjct 6634 CTGCTGATCTGGAGGAATTCCTTCCTTGTCTTGAATTTTAGCTTTGACATTTTCAATAGT 6575 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || | ||||| || | |||||||||||||| || | ||| || | ||| ||||| Sbjct 6574 GTCAGAAGCCTCTACCTCCAAGGTAATGGTTTTACCCGTCAGTGTCTTCACAAAGATCTG 6515 Query 192534 CATTTTA 192540 |||| || Sbjct 6514 CATTGTA 6508 >seq4162 Length=60589 Score = 118 bits (130), Expect = 2e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || | |||||| | ||||||||| | ||| | |||||| ||| ||||| || Sbjct 57423 ATGCCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCG 57482 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| | | || || | |||||||||||| ||||| | | ||| || || || Sbjct 57483 GACAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGA 57542 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| || || || || || || ||| ||||| || | ||||| | ||| Sbjct 57543 GGAATTCCCTCCTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCC 57602 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || |||| ||| |||||||| || || | || || | || ||||||||||| Sbjct 57603 ACCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 57655 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | || ||||| | ||| | ||| || ||| || |||||| Sbjct 57195 ATGCCACCACGGAGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCA 57254 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| |||| || | |||||||||||| ||||| | | ||||| || ||| Sbjct 57255 GAGAGGGTACGTCCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGT 57314 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || ||| ||||| |||| ||||| | || Sbjct 57315 GGGATACCTTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCG 57374 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || ||||| || ||||| ||||| | || || ||||| Sbjct 57375 ACTTCCAAGGTTATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 57424 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| || || || || | || | ||||| ||| || || || Sbjct 56967 ATACCACCACGAAGACGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCC 57026 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| |||| || | || |||||||| ||||| | || ||| || || ||| Sbjct 57027 GAAAGAGTTCTACCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGT 57086 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| || || || || || || || || | || || | ||| Sbjct 57087 GGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCG 57146 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || |||||||| || || | ||||| | || || ||||| Sbjct 57147 ACTTCCAGGGTGATGGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCAT 57196 >seq3638 Length=67878 Score = 118 bits (130), Expect = 2e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || | |||||| | ||||||||| | ||| | |||||| ||| ||||| || Sbjct 12074 ATGCCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCG 12133 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| | | || || | |||||||||||| ||||| | | ||| || || || Sbjct 12134 GACAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGA 12193 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| || || || || || || ||| ||||| || | ||||| | ||| Sbjct 12194 GGAATTCCCTCCTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCC 12253 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || |||| ||| |||||||| || || | || || | || ||||||||||| Sbjct 12254 ACCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 12306 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| || || || || | || | ||||| ||| || || || Sbjct 11249 ATACCACCACGAAGACGCAAGACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCC 11308 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| | |||| || | |||||||||||| ||||| | | ||||| || ||| Sbjct 11309 GAAAGAGTTCTTCCATCCTCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGT 11368 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| || || || || | || || | ||| Sbjct 11369 GGAATACCTTCTTTGTCTTGAATTTTGGCCTTGACGTTCTCAATGGTGTCGGAAGCTTCC 11428 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||||||||| || ||||| || | || |||||||| Sbjct 11429 ACCTCCAGGGTGATGGTTTTACCGGTCAATGTCTTGACGAAGATCTGCAT 11478 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | || ||||| | ||| | ||| || ||| || |||||| Sbjct 11846 ATGCCACCACGGAGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCA 11905 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| |||| || | |||||||||||| ||||| | | ||||| || ||| Sbjct 11906 GAGAGGGTACGTCCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGT 11965 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || ||| ||||| |||| ||||| | || Sbjct 11966 GGGATACCTTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCG 12025 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || ||||| || ||||| ||||| | || || ||||| Sbjct 12026 ACTTCCAAGGTTATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 12075 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | ||||| ||||| || || | || | ||| || ||| ||||| || || Sbjct 11023 ACCACCACGGAGACGCAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGA 11082 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||| | |||| || | |||||||| || ||||| | | |||||| || || || Sbjct 11083 GAGAGTTCTTCCATCCTCGAGCTGTTTACCCGCGAAGATAAGACGCTGTTGGTCTGGAGG 11142 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 ||||| ||||| || || || ||| || || || || | |||||| | || || Sbjct 11143 GATTCCCTCTTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTATCTGAAGCCTCAAC 11202 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| || || |||||||||||||| | || || | || |||||||| Sbjct 11203 TTCGAGGGTGATGGTTTTACCAGTCAGAGTCTTGACGAAGATCTGCAT 11250 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| || || || || | || | ||||| ||| || || || Sbjct 11618 ATACCACCACGAAGACGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCC 11677 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| |||| || | || |||||||| ||||| | || ||| || || ||| Sbjct 11678 GAAAGAGTTCTACCATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGT 11737 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| || || || || || || || || | || || | ||| Sbjct 11738 GGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCG 11797 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || |||||||| || || | ||||| | || || ||||| Sbjct 11798 ACTTCCAGGGTGATGGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCAT 11847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984364509420600