Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq2487 105 8e-18 seq1115 105 8e-18 >seq2487 Length=14168 Score = 105 bits (116), Expect = 8e-18 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 |||||||||| ||| | || | || ||||| || | | ||| ||| | |||| Sbjct 2380 AAGAACTTTTGTGGTTCATCAGTGGATCAACGAATGCTCATACATTGTCTGAAAAGGGTG 2439 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAA- 172517 || | ||||| ||| ||| | || | |||||||||||| || ||| | ||| Sbjct 2440 TTCGAATTTGGGATGCTAACAGCTCAAGAGAATTTTTAGATAGTCTTGGATTT-CAGAAT 2498 Query 172518 AGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAA 172577 || |||||||||||||||| ||||||||||||||||||||||||||| || ||||| Sbjct 2499 AGGGAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATTTTGGAGCTCAG 2558 Query 172578 TATATCGACTGTG-ATACAGATTACACAGGACAAGG 172612 |||| | | | || | |||| || || |||||||| Sbjct 2559 TATA-CTAATATGCACGCAGACTATACCGGACAAGG 2593 >seq1115 Length=173343 Score = 105 bits (116), Expect = 8e-18 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 116804 ACTCAAGATAGTAGTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACATGGGATAGTATT 116863 ||| ||||| || |||||||||| ||| |||||||| |||||||| ||||| ||||| Sbjct 133555 ACTAAAGATGTTAACAAAAAAAATGTTGTCATTATGGGACGAAAAACGTGGGAGGGTATT 133496 Query 116864 CCTAATAAATTTAAACCATTAAAAAATCGAATAAATATAAT 116904 || || ||||||| |||| || |||||||||||||||| || Sbjct 133495 CCAAAAAAATTTAGACCACTACAAAATCGAATAAATATTAT 133455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632417211565280