Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq4162 129 5e-25 seq3638 129 5e-25 >seq4162 Length=60589 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| ||||||||||| || || || ||||| ||||| ||||| | | ||| || Sbjct 57209 ACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCC 57268 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| ||||| | || | | ||| || || || || ||||| || || Sbjct 57269 ATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTT 57328 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||| ||| |||| | |||||| ||| || ||||| | ||||| Sbjct 57329 GTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTAT 57388 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| ||||| || || || ||||| Sbjct 57389 CGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 57424 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| || ||||| || ||||| ||||| || |||||||| || | Sbjct 57426 CCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGAC 57485 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || ||||||||||| ||||| | || | | ||||| || || ||| Sbjct 57486 AAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGA 57545 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || ||| || | ||| ||| |||| | ||||| || ||| || Sbjct 57546 ATTCCCTCCTTGTCCTG-AATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCAC 57604 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | |||||| ||||| || || | || || || || ||||||||||| Sbjct 57605 CTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 57655 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| || || || ||||||||||| ||||| || |||| || || | | Sbjct 56981 ACGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACC 57040 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | || | || ||||| || || ||||| || ||||| Sbjct 57041 ATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTT 57100 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| ||| ||| ||||| || || || Sbjct 57101 GTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGAT 57160 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || | ||||| || || || ||||| Sbjct 57161 GGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCAT 57196 >seq3638 Length=67878 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| ||||||||||| || || || ||||| ||||| ||||| | | ||| || Sbjct 11860 ACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGTCC 11919 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| ||||| | || | | ||| || || || || ||||| || || Sbjct 11920 ATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTT 11979 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||| ||| |||| | |||||| ||| || ||||| | ||||| Sbjct 11980 GTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTTAT 12039 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| ||||| || || || ||||| Sbjct 12040 CGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCAT 12075 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| ||||| ||||||||||| || ||||| || |||| || || | Sbjct 11263 ACGCAAGACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAAAGAGTTCTTCC 11322 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||||||||| ||||| | || | | ||| || || || |||||||| ||||| Sbjct 11323 ATCCTCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTT 11382 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | ||||| | || | ||||| ||| ||| || || || || | Sbjct 11383 GTCTTG-AATTTTGGCCTTGACGTTCTCAATGGTGTCGGAAGCTTCCACCTCCAGGGTGA 11441 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || || || || || || || |||||||| Sbjct 11442 TGGTTTTACCGGTCAATGTCTTGACGAAGATCTGCAT 11478 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| || ||||| || ||||| ||||| || |||||||| || | Sbjct 12077 CCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGAC 12136 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | || ||||||||||| ||||| | || | | ||||| || || ||| Sbjct 12137 AAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGA 12196 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || ||| || | ||| ||| |||| | ||||| || ||| || Sbjct 12197 ATTCCCTCCTTGTCCTG-AATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCAC 12255 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | |||||| ||||| || || | || || || || ||||||||||| Sbjct 12256 CTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 12306 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| || || || ||||||||||| ||||| || |||| || || | | Sbjct 11632 ACGCAAGACCAAGTGGAGTGTTGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTTCTACC 11691 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | || | || ||||| || || ||||| || ||||| Sbjct 11692 ATCCTCAAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATTCCTTCTTT 11751 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| ||| ||| ||||| || || || Sbjct 11752 GTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAAGCTTCGACTTCCAGGGTGAT 11811 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || | ||||| || || || ||||| Sbjct 11812 GGTTTTTCCCGTCAGAGTTTTGACGAAAATTTGCAT 11847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385176213870996