Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq2618 95.1 2e-14 seq6001 91.5 2e-13 seq2977 91.5 2e-13 seq123 91.5 2e-13 seq3288 87.8 2e-12 seq7793 82.4 1e-10 >seq2618 Length=63290 Score = 95.1 bits (104), Expect = 2e-14 Identities = 72/84 (86%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 8647 CGATGCCT-TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACC 8705 |||||| | || || ||| |||||||||||| ||||| |||| ||||| | ||||||||| Sbjct 42202 CGATGCATGTAATCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACC 42261 Query 8706 GGGGTTCGATTCCCCGACGAGGAG 8729 |||||||||||||||| ||| ||| Sbjct 42262 GGGGTTCGATTCCCCGCCGAAGAG 42285 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 42214 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 42273 Query 11789 CCCGACGAGGAG 11800 |||| ||| ||| Sbjct 42274 CCCGCCGAAGAG 42285 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 ||| ||| |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 42285 CTCTTCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 42226 Query 139413 TACTAACGAGGATT 139426 ||||| ||| |||| Sbjct 42225 TACTACCGAAGATT 42212 >seq6001 Length=56233 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 ||||| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 50108 TATTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 50049 Query 8715 TTCCCCGACG 8724 ||||||| || Sbjct 50048 TTCCCCGCCG 50039 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 50105 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 50046 Query 11789 CCCGACG 11795 |||| || Sbjct 50045 CCCGCCG 50039 >seq2977 Length=13716 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 ||||| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 2358 TATTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 2417 Query 8715 TTCCCCGACG 8724 ||||||| || Sbjct 2418 TTCCCCGCCG 2427 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2361 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2420 Query 11789 CCCGACG 11795 |||| || Sbjct 2421 CCCGCCG 2427 >seq123 Length=180532 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 ||||| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 167860 TATTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 167919 Query 8715 TTCCCCGACG 8724 ||||||| || Sbjct 167920 TTCCCCGCCG 167929 Score = 82.4 bits (90), Expect = 1e-10 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 167863 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 167922 Query 11789 CCCGACG 11795 |||| || Sbjct 167923 CCCGCCG 167929 >seq3288 Length=53303 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 8662 CGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 8721 || |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| Sbjct 6075 CGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 6134 Query 8722 ACGAGGAG 8729 || |||| Sbjct 6135 CCGCGGAG 6142 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 11734 CGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 11792 || |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| Sbjct 6075 CGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 6134 Query 11793 ACGAGGAG 11800 || |||| Sbjct 6135 CCGCGGAG 6142 >seq7793 Length=27568 Score = 82.4 bits (90), Expect = 1e-10 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 8662 CGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCG 8721 || |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| Sbjct 16621 CGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 16680 Query 8722 ACG 8724 || Sbjct 16681 CCG 16683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652770081912640