Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5471 259 1e-63 seq2246 109 1e-18 >seq5471 Length=104876 Score = 259 bits (286), Expect = 1e-63 Identities = 585/866 (68%), Gaps = 19/866 (2%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 |||||||||||||||||| | ||| | |||||| || | |||||| ||||| || Sbjct 20714 TATTTTGGTTTCAAAACTTTGGAAAGAAGTTATTTGCTGAAAATAAATGGCAAGATCGTT 20655 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | |||||||| ||||| | || || || |||||||||||| | | | || | Sbjct 20654 GAAAGACCTCAACATATGTTGATGCGCGTCGCTGTTGGTATTCATGAAGACAACATCGAT 20595 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGT---AAAAAGAAAGCTATTCATGCTACTCCT 110480 || |||||| || || ||| | || ||||| | | | |||||| | || Sbjct 20594 CGAGTGATTGAAACATACAAT-TAT-ATGTCTGAAAAATATTTC-ACTCATGCATCACCG 20538 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || || ||| ||| | ||||| || |||| || | ||| ||| | || ||| Sbjct 20537 ACACTTTTTTCTGCATGTACTAAGAGACAACAAATGTCGAGTTGTTTTTTGCTCACAATG 20478 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 | || || |||| |||| ||||||||| | | || | |||| | || |||| Sbjct 20477 ATTGAAGACAGTATTCAAGGAATTTATGATACGATGAAGAGATGTGCTTTAATCAGTAAA 20418 Query 110601 AACTCTGGAGGAATTGGTATTCAC-GTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 | |||| |||||||| ||| | | |||| |||| | | |||| | | || Sbjct 20417 ACGGCTGGTGGAATTGG-ATTGAGTGCTCATAATATCAGAGCTGCAGGAACTAGAATAAA 20359 Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 || || || ||||| ||| ||| ||||||| | ||||| ||||| | || || Sbjct 20358 AAGTAACAATGGAATTTCAAATGGTCTTATTCCAATTCTTAGAGTTTTCAATAATACAGC 20299 Query 110720 AAAATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACC 110776 || |||||| ||||||||||||| | || ||| ||||||| ||||| | ||||| Sbjct 20298 AAGATATGTTGATCAAGGTGGTAATAAAAGACCTGGAGCATTTGCAATCTACTTAGAACC 20239 Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836 ||||||| |||||||||||||||| |||| || | |||||| ||| || ||||| Sbjct 20238 TTGGCATGCAGATATATTTGAATTTCTAGATCTGAGAAAAAATACAGGCAAAGATGAACA 20179 Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896 | || ||||||||||| |||||| | ||||| | |||||||| |||| | | || Sbjct 20178 TCGCGCTCGTGATTTATTCTATGCACTATGGATCCCGGATTTATTTATGAGCC--GCACA 20121 Query 110897 AGAAA--ATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTA 110954 | ||| ||| | ||| | | |||||||| || || ||||| ||| || Sbjct 20120 AAAAATGATGATGTATGGAGTTTGATGTGTCCGAATTTATCACCTGGGCTAGACGAATGC 20061 Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCA-A 111013 | || |||| ||||||| | || ||||||||||| ||||| ||| | | Sbjct 20060 TGGGGTGAAGAATTTGAAGCATTATATACTAAATATGAAAATGAAGG-TCGTTATGTACG 20002 Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAAC 111073 || |||||||||| ||| | ||| || | ||||||||||||||||||| || Sbjct 20001 TCAGATTCCAGCTCGAGAGTTGTGGACTGCTATTTTGAAATCACAAGTTGAAACTGGTAC 19942 Query 111074 TCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAAC 111133 || ||||| | |||||||| || ||||| |||||||||||| ||||| || || Sbjct 19941 ACCATATATGGTTTATAAAGACCACTGCAATCGTAAATCTAATCAACAAAATTTGGGCAC 19882 Query 111134 AATTAAGTCTAGTAA--TTTGTGCTG 111157 ||||| ||||| ||||| ||| Sbjct 19881 CATTAAAAGCAGTAATCTTTGTACTG 19856 >seq2246 Length=30680 Score = 109 bits (120), Expect = 1e-18 Identities = 273/410 (67%), Gaps = 10/410 (2%) Strand=Plus/Plus Query 110751 GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTT 110810 ||| |||||||||| || | ||||| ||||||||||||||||| || | | || || Sbjct 26704 GGCGCATTTGCTATTTACATTGAACCCTGGCATTCAGATATATTGGACGTACTTGA--TT 26761 Query 110811 CGTAAAA-ATCA-AGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGA 110868 | |||| | || ||| ||||| | ||||||| || |||| || | |||||| Sbjct 26762 TGAAAAAGAACACTGGAAAAGAAGAGTATCGAGCACGGGAACTATTCTACGGGCTGTGGA 26821 Query 110869 TTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTC 110928 | ||||||| || ||| ||||||| |||| || || | ||| || |||||||| | Sbjct 26822 TCCCAGATTTGTTTATGCAACGTGTGAAAGATAACGGAAAATGGAGCCTGATGTGTCCGC 26881 Query 110929 ATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAAT 110988 ||| || || ||||| ||| || || || | || ||||| | ||| |||| Sbjct 26882 ATCAATCCCCAGGTCTTCACGATTCATGGGGTGAAAAATTCGAAGAAATCTACACGAAAT 26941 Query 110989 ATGAAAAAGAAG---GCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045 | ||| | ||| || | |||| ||| | || | || | ||| | | Sbjct 26942 ACGAAGAGCAAGGTCGCTATGTTCG---TCAAGTCGAGGCGCGTGATATCTGGATGGCGA 26998 Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105 | || | |||||||| ||||| || ||||| || || | || ||||||||| |||| Sbjct 26999 TACTCAAGTCACAAGTCGAAACAGGCACTCCGTACATGGTCTACAAAGATCATTGCAATC 27058 Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 | ||||| || || | || | || || || || |||||||||||| Sbjct 27059 GTAAATCAAACCACCAGCATCTGGGTACCATAAAAAGCAGTAATTTGTGC 27108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186673573506916