Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq7819 291 3e-74 seq300 212 3e-50 seq7820 116 1e-21 >seq7819 Length=39659 Score = 291 bits (322), Expect = 3e-74 Identities = 348/472 (74%), Gaps = 9/472 (2%) Strand=Plus/Plus Query 25528 GGGGCTTCTGCGCCTGAAATCCTGGATCAGTTTCTGGATGAAAAAGAAGGTAACCACACC 25587 || ||||| || || |||| || || |||||| ||||||| ||||| || || Sbjct 10087 GGCGCTTCGGCCCCAAAAATTCTCGACCAGTTTTTGGATGAGAAAGAGGGGAATAGTCTT 10146 Query 25588 ACGGCATACCGTGATGGTGCGGGGATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGAT 25647 || || ||| ||||| || |||||||| || |||||||| ||||| ||| ||| Sbjct 10147 ACTGCGTACAAGGATGGAAGTGGCATCTGGACGATTTGCCGTGGTGCCACAATGGTTGAT 10206 Query 25648 GGTAAGCCTGTGATTCCTGGCATGAAGCTGTCGAAGGAAAAATGCGACCGGGTTAACGCT 25707 |||||| | || | | ||||||||| | || ||| |||||||||| |||||| || Sbjct 10207 GGTAAGTCAGTTGTGCAGGGCATGAAGTTAACGCAGGCAAAATGCGACAAGGTTAATGCC 10266 Query 25708 ATCGAACGGGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCACTGACTGAA 25767 ||||||||||||||||| ||||| ||||| || || |||||||| || ||||| ||| Sbjct 10267 ATCGAACGGGATAAGGCTCTGGCGTGGGTTGACCGCAATATCAAAGTTCCTCTGACCGAA 10326 Query 25768 CCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAACATTGGCCCGGGTAAGTGTTTC 25827 || || ||||| || || || || ||||| || |||||||| ||||| || || || ||| Sbjct 10327 CCTCAAAAAGCCGGAATCGCATCTTTCTGCCCGTACAACATAGGCCCAGGCAACTGCTTC 10386 Query 25828 CCGTCGACGTTTTATAAACGAATTAATGCAGGAGATCGAAAAGGTGCCTGCGAAGCGATT 25887 || |||||||| ||||| || ||||||| || || || ||||| |||||||| ||||| Sbjct 10387 CCATCGACGTTCTATAAGCGTCTTAATGCTGGCGACCGCAAAGGGGCCTGCGAGGCGATA 10446 Query 25888 CGCTGGTGGATTAAGGACGGTGGCAGGGACTGCCG-----TATTCGCTCA----AATAAC 25938 || |||||||| || || |||||| | |||||||| | | ||| ||| Sbjct 10447 CGATGGTGGATAAAAGATGGTGGCCGTGACTGCCGACTAACAAAGGGTCAGAAGAATGGG 10506 Query 25939 TGTTATGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGTGCTGGG 25990 || || || ||||| || ||||||||||| || ||||| || ||||||| Sbjct 10507 TGCTACGGGCAGGTTGAACGCCGTGACCAGGAAAGTGCGCTTGCCTGCTGGG 10558 >seq300 Length=47897 Score = 212 bits (234), Expect = 3e-50 Identities = 232/310 (75%), Gaps = 9/310 (3%) Strand=Plus/Minus Query 25698 GGTTAACGCTATCGAACGGGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCC 25757 |||||||||||| ||||| |||||||| | || ||||| || || ||||||||||| Sbjct 11071 GGTTAACGCTATTGAACGCGATAAGGCATTAGCCTGGGTTGACCGCAATATCAAAGTGCC 11012 Query 25758 ACTGACTGAACCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAACATTGGCCCGGG 25817 ||||| || || ||||| | |||||||| || ||||| || || ||||| ||||| || Sbjct 11011 TCTGACAGAGCCACAGAAGGTAGGTATTGCATCCTTCTGCCCGTATAACATCGGCCCCGG 10952 Query 25818 TAAGTGTTTCCCGTCGACGTTTTATAAACGAATTAATGCAGGAGATCGAAAAGGTGCCTG 25877 ||| || || || ||||| || ||| || || |||||||| || || | ||||| || Sbjct 10951 TAAATGCTTACCCTCGACATTCTATCGGCGCATCAATGCAGGTGACCGCATCGGTGCATG 10892 Query 25878 CGAAGCGATTCGCTGGTGGATTAAGGACGGTGGCAGGGACTGCCGTATTCGCTCA----- 25932 |||||| || ||||||||||||||||||||||| | || |||||| | | | Sbjct 10891 CGAAGCAATCCGCTGGTGGATTAAGGACGGTGGACGAGATTGCCGTCTGACCAAAGGCCA 10832 Query 25933 ----AATAACTGTTATGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGTGCTG 25988 ||| ||| ||||||||||| || ||||| ||||| ||||| ||||| ||||| Sbjct 10831 GAAGAATGGCTGCTATGGTCAGGTGGAACGACGTGATCAGGAAAGCGCTCTGGCATGCTG 10772 Query 25989 GGGAATCGAC 25998 ||| || ||| Sbjct 10771 GGGGATAGAC 10762 >seq7820 Length=47423 Score = 116 bits (128), Expect = 1e-21 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 17285 TCCCTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCACGCAAAAATGCTCGAAACTGAT 17344 |||||||||||||||||||| || || || || || || ||||||||||| ||| | || Sbjct 29402 TCCCTCATCCTCTGGACAGAGCGAGGCGCTGCTCGCCATGCAAAAATGCTGGAATCAGAC 29343 Query 17345 CAGGCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTATTTCAGCCA 17391 || || |||||||| ||||||||||||||||| || ||||||| ||| Sbjct 29342 CAAGCTTGGGAAGTATTCGAAAAACTGGAAGATTGTTATTTCAACCA 29296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200489625116560