Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq356 140 8e-29 seq320 107 5e-19 seq8198 91.5 4e-14 >seq356 Length=90444 Score = 140 bits (154), Expect = 8e-29 Identities = 403/618 (65%), Gaps = 13/618 (2%) Strand=Plus/Plus Query 29955 CAGAAATCACCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGA 30014 ||||||||||| || |||||| |||| ||||| || | ||| || | |||||| |||||| Sbjct 33534 CAGAAATCACCAGGATCAACATCCTGTTCAGGATCTATGAGTATGAGCATTCCCTCAGGA 33593 Query 30015 AAGCTTGGCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAAT 30074 ||||| || || |||| || || ||||| |||| |||| ||||||||||| || Sbjct 33594 AAGCTCGGTTTTACTCCTGGAGGCGCAGTCATCGAATGACCTGATACCTCAAGCCAAAAG 33653 Query 30075 GCAGAATCACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAG 30134 || || ||||| ||||| || || |||||| || ||| || | || || | Sbjct 33654 GCGGAGTCACTAGCTTTAACAGTGGTTGAAACCCATTCCTTCGCGTCGCGTTCTGTGTAT 33713 Query 30135 GTTCTAAGCTCAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATAC 30194 | |||| | || | || || || || || | | || | ||||||||||| Sbjct 33714 GAGCTAA---CGGGGCAAAATGAGCCCGCTTGTACTTCGGTTAATAACGGGTACTCATA- 33769 Query 30195 TCACTTCTAAGTGACGGCTGC--ATACTAACCGCTTCATACATCTCGTAGATTTCTCTGG 30252 ||| | ||| || | | | ||| ||| |||| | | ||||| | Sbjct 33770 -CACAGAGGATTGATTTCTTCCGTTCGCTATCGCCTCAAACATAGCTGAAATTTCAGCTG 33828 Query 30253 CGATTGAAGGGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGCAAGCAATGCGGCGT 30312 | | || ||||| || || || || | ||| ||||||||| || | | |||||| | Sbjct 33829 CAAGGGATGGGCTGAAATCATCGACTTTTACTCCGAGAATTTTAGCGAACTGTGCGGCAT 33888 Query 30313 TATAAGCATTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCC 30372 | ||| || | || || |||| || | ||| |||| || |||||||||| Sbjct 33889 GAGTAGCGTTGATAGCGTTTGTGCCGTTCAGTAACTGCGCAACACCACTTTGCCCCATCC 33948 Query 30373 CCATCTTGTCTGCGACAGATTCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAA 30432 |||| | || || | || ||||| || | || || | |||||||| ||| ||| Sbjct 33949 CCATTTGTTCAGCCAAAGTCTCCTGTGAGAGCCCCAGCACTTTTTTCTTGGACTCAAAAA 34008 Query 30433 TTGCTTTAAGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGC 30492 | ||||| || | || || |||| || || || |||||||||||||| | | Sbjct 34009 TAGCTTTCAGCCTGTTGGCATCAGCAAGTTGTTCGGCGGTCAATGGTTTCTTTTTCATTC 34068 Query 30493 TCATACGTTAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATT 30552 |||| ||| |||||||||| || |||| | | | ||||| |||||||| | Sbjct 34069 TCAT------AATTTATCACCGCACGGCATAATCACCAATCACCGCTAGTGTTGACATAT 34122 Query 30553 TTACCTCTGGCGGTGATA 30570 ||| | || | |||||| Sbjct 34123 TTATCACTAACAGTGATA 34140 >seq320 Length=67307 Score = 107 bits (118), Expect = 5e-19 Identities = 222/325 (68%), Gaps = 8/325 (2%) Strand=Plus/Minus Query 21267 ATCGGCACCATTAAAATCAATAAGTTACAC-ATCATTAGTACCTTCCTTATTTTTTGACT 21325 |||||||||||||||||||||||||||| | || ||| | | |||| ||| | Sbjct 62637 ATCGGCACCATTAAAATCAATAAGTTACGCTATTCTTATTGC--TCCTCCATTTAAGGGG 62580 Query 21326 GG-GACAAATTTGGGACCGATGGGTTCAGGA--TCGAGTCTATTTGCCGTGCGTGTTCGG 21382 || ||| ||||||||| | || || |||| || ||||| | |||||||| Sbjct 62579 GGAGACCTATTTGGGACGTAACCC--CAAGAAATCGAATCAATTTGGCTCGCGTGTTCCT 62522 Query 21383 TAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAACCATTTCGATAGACTCCCAGCCTC 21442 | | | | | | ||| ||||| || | ||||| |||| | ||| || || | Sbjct 62521 GCAAACGCCTGGTCGATAAGTGCGCATAACGTTGCACCATATCGAGCGTCTCTCATCCCC 62462 Query 21443 CCATTTCCTGTAACACTGACAATGGGACTCCGGCTTGAACCAGCCAACTTGCCCAGGTGT 21502 |||||| || | | | | | || || |||||| |||||||| ||| | |||| Sbjct 62461 CCATTTGCTTGAGAGCCAAAAGAGAAACCCCAATTTGAACAAGCCAACTCGCCTAAGTGT 62402 Query 21503 GTCTCAAGTCGTGAAATCTGAAATCATCAATACCAGCCCGTCTCAGCGCCGCTTTCCAGG 21562 | | |||||||||||||||||||| || || | || || | || || |||||||| | Sbjct 62401 GCCGCAAGTCGTGAAATCTGAAATTCTCGATCCAGGCACGGCGTAGGGCGGCTTTCCATG 62342 Query 21563 CTGTGTTTGCGTCATACCGCATCTT 21587 | ||||| | |||||| ||||| || Sbjct 62341 CCGTGTTAGAGTCATAGCGCATTTT 62317 Score = 82.4 bits (90), Expect = 2e-11 Identities = 124/173 (72%), Gaps = 5/173 (3%) Strand=Plus/Minus Query 21106 TGAGACAAAACTGAGACACATAAGGCCTCACAATGGCTTGCAAGGCTTTACATGTTTTGA 21165 |||||| || |||||| ||||| | | | || || |||||||| || |||| Sbjct 56477 TGAGACGTAAATGAGACGAGAAAGGCTTTAAGAGGGTTTCTAAGGCTTTCCAACTTTTCG 56418 Query 21166 TGTGGTGGGACGTGTGAGCGCAGTGTTGATGGGATAA--TCCTTTGAATTACAAGCGGAT 21223 | ||| |||||||||||| | ||| | ||| | || || ||| ||| || Sbjct 56417 CATTATGGAACGTGTGAGCGC-GACAGAATGCGGTAAGTTACTGTG--TTAAAAGGTAAT 56361 Query 21224 TCTTATAATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCA 21276 | | |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 56360 TATGCAGATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCTCCA 56308 >seq8198 Length=2870 Score = 91.5 bits (100), Expect = 4e-14 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 23148 TTGCGCTGTAATTCTTCGATTTCTGATGCTGAATCAATGATGTCTGCCATCTTTCATTAA 23207 || ||||| | ||||| || |||| ||| | ||| |||||||| ||||| | || | Sbjct 2715 TTACGCTGAAGCTCTTCAATCTCTGCTGCGGTATCGATGATGTCGGCCATGGT-CAGTGC 2773 Query 23208 TCCCTGAATTGTTGGTTAATACGCTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGT 23267 |||| ||| ||| ||||||| || |||| |||||| || | ||||||||||| || | Sbjct 2774 TCCCGGAACTGTCGGTTAATTCGGTTGAAGGTGAACGCCAGCAATAAAAAAGGCCGCTTT 2833 Query 23268 AGCTCCCTGATGATTTTGCTTTTCATG 23294 ||| |||| |||||| ||||||| Sbjct 2834 AGCGACCTGGTGATTTGCGATTTCATG 2860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122709856613272