Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq328 123 7e-24 seq340 87.8 5e-13 >seq328 Length=46563 Score = 123 bits (136), Expect = 7e-24 Identities = 182/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 41199 GGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATC 41258 ||| | || || ||| | || |||||||| || || ||||| ||||| || | | | Sbjct 31533 GGCCAGGACCCGGAAGTACGCTACATGCCGAGTGGTGGCGCAGTTGCCAACATTACGCTG 31474 Query 41259 GCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGG 41318 || || | ||| |||| |||||| | ||||| |||| |||||| || || |||||| Sbjct 31473 GCTACGTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTGAATGG 31414 Query 41319 CACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGT 41378 ||||||||||| | || || || ||||| ||| | || | ||||| ||||| || ||| Sbjct 31413 CACCGCGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCCGGTGAATATCTGCGTAAGGGT 31354 Query 41379 AGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTT 41438 |||| | || |||||| ||||| || || |||||| || ||| | |||| Sbjct 31353 TCTCAGGTCTATATCGAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGCGCC 31294 Query 41439 GATCGCTACACCACTGAA 41456 || |||||||||||| Sbjct 31293 GAGAAGTACACCACTGAA 31276 >seq340 Length=80703 Score = 87.8 bits (96), Expect = 5e-13 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 16000 CTTCCGGTGATAACTGGATGCGCGCGCGGAAATCATCGTCAGATTCCATGACGGCGGCCA 16059 ||||||||| |||||||||| || ||||| || ||||||||||| || | | Sbjct 4324 CTTCCGGTGCCTGCTGGATGCGCAGACGAAAATCGGTATCGGATTCCATGACCGCCGGCG 4265 Query 16060 CTGGCGGCACTGCGTCAGGGTCAGCCGGTGTGATGGTCTGCCGTTCCACGTTGACGTTTG 16119 ||||| | | | ||| || || || || | | || || | ||| |||||| Sbjct 4264 TGGGCGGGAACGTGGTGTCGTCGGCGGGCGTAATCACCAGACGCTCAAGGTTAGCGTTTG 4205 Query 16120 CGCCAAGCTGGTCCAGGTCGGAACCGGTGGCGTAGGCCAGCATGATGGCTTTGGCGGCCT 16179 | |||| |||||| || ||| || | ||||||||||||||||| || ||||||| Sbjct 4204 CCCCAATCTGGTCGAGATCGCTGCCCGCGGCGTAGGCCAGCATGACCGCACGCGCGGCCT 4145 Query 16180 CATTGACGCGATGACGCATCAGCAGTTCACGATAGGCG 16217 | || ||||| |||||| | | ||| ||||| ||| Sbjct 4144 CGTTAACGCGCTGACGCCAGATAACTTCCCGATACGCG 4107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133195116453216