Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4162 187 3e-42 seq3638 187 3e-42 seq7856 147 2e-30 seq353 113 5e-20 seq2246 87.8 2e-12 >seq4162 Length=60589 Score = 187 bits (206), Expect = 3e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || || || || || || ||| | ||||| || || Sbjct 57653 AATGCAGATCTTCGTGAAGACTCTGACAGGAAAAACCATAACTTTAGAGGTGGAAGCATC 57594 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | |||| |||| || || |||||||||||||||||||||||||||||||| Sbjct 57593 AGACACCATCGAAAATGTGAAAGCCAAGATTCAGGACAAGGAGGGAATTCCTCCAGACCA 57534 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || |||||||| ||||||||||| | | ||| | | |||||||| Sbjct 57533 GCAGCGTCTCATCTTCGCTGGTAAACAACTCGAGGACGGAAGAACCTTGTCCGACTATAA 57474 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || |||||||| ||| |||| |||||||||| || || Sbjct 57473 CATCCAGAAAGAGTCCACTCTCCATTTAGTACTGCGTCTTCGTGGAGG 57426 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || || || || || || || || || || || || | Sbjct 57196 ATGCAAATTTTCGTCAAAACTCTGACGGGAAAAACCATCACCCTGGAAGTCGAAGCTTCC 57137 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || |||||||| || |||||||| ||||||||| Sbjct 57136 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 57077 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||||||||| || ||||||| | | || || | ||||| || Sbjct 57076 CAGCGACTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTAGAACTCTTTCGGACTACAAC 57017 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| ||||| || || || | |||||||||||||| ||||| Sbjct 57016 ATCCAAAAAGAATCAACACTCCACTTGGTCTTGCGTCTTCGTGGTGG 56970 >seq3638 Length=67878 Score = 187 bits (206), Expect = 3e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || || || || || || ||| | ||||| || || Sbjct 12304 AATGCAGATCTTCGTGAAGACTCTGACAGGAAAAACCATAACTTTAGAGGTGGAAGCATC 12245 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | |||| |||| || || |||||||||||||||||||||||||||||||| Sbjct 12244 AGACACCATCGAAAATGTGAAAGCCAAGATTCAGGACAAGGAGGGAATTCCTCCAGACCA 12185 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || |||||||| ||||||||||| | | ||| | | |||||||| Sbjct 12184 GCAGCGTCTCATCTTCGCTGGTAAACAACTCGAGGACGGAAGAACCTTGTCCGACTATAA 12125 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || |||||||| ||| |||| |||||||||| || || Sbjct 12124 CATCCAGAAAGAGTCCACTCTCCATTTAGTACTGCGTCTTCGTGGAGG 12077 Score = 168 bits (186), Expect = 8e-37 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || || || || || || || |||||| | Sbjct 11250 ATGCAGATCTTCGTCAAGACTCTGACTGGTAAAACCATCACCCTCGAAGTTGAGGCTTCA 11191 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | |||||||| || |||||||| |||||||| ||||||||||| Sbjct 11190 GATACCATCGAGAACGTCAAGGCTAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCAA 11131 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || ||||| || |||||||||| | || || | |||||||| Sbjct 11130 CAGCGTCTTATCTTCGCGGGTAAACAGCTCGAGGATGGAAGAACTCTCTCCGACTATAAC 11071 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| ||||| ||||| | || |||||||| || ||||| ||| Sbjct 11070 ATCCAGAAGGAGTCCACCCTTCACTTGGTATTGCGTCTCCGTGGTGGTCAA 11020 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | ||||| || || || || || ||||| || | Sbjct 11478 ATGCAGATCTTCGTCAAGACATTGACCGGTAAAACCATCACCCTGGAGGTGGAAGCTTCC 11419 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| |||||||| ||||| || || ||||| |||||||| Sbjct 11418 GACACCATTGAGAACGTCAAGGCCAAAATTCAAGACAAAGAAGGTATTCCACCAGACCAA 11359 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || |||||||| ||||||||||||| | || || | ||||| || Sbjct 11358 CAACGTCTTATCTTCGCTGGTAAACAACTCGAGGATGGAAGAACTCTTTCGGACTACAAC 11299 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||| ||||| | |||||||||||||| ||||| Sbjct 11298 ATCCAGAAAGAATCCACCCTTCACTTGGTCTTGCGTCTTCGTGGTGG 11252 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || || || || || || || || || || || || | Sbjct 11847 ATGCAAATTTTCGTCAAAACTCTGACGGGAAAAACCATCACCCTGGAAGTCGAAGCTTCC 11788 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || |||||||| || |||||||| ||||||||| Sbjct 11787 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCACCAGACCAG 11728 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||||||||| || ||||||| | | || || | ||||| || Sbjct 11727 CAGCGACTTATCTTCGCTGGTAAGCAGCTTGAGGATGGTAGAACTCTTTCGGACTACAAC 11668 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| ||||| || || || | |||||||||||||| ||||| Sbjct 11667 ATCCAAAAAGAATCAACACTCCACTTGGTCTTGCGTCTTCGTGGTGG 11621 >seq7856 Length=18030 Score = 147 bits (162), Expect = 2e-30 Identities = 158/207 (76%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 27390 CAGAAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCT 27449 |||||| |||| |||||| |||||||| ||||| || || || || || ||||| | Sbjct 6499 CAGAAAACTTAC---AATGCAGATCTTTGTGAAGACACTGACGGGTAAAACCATTACCTT 6555 Query 27450 TGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 ||||| ||| | ||| | |||| |||| | || ||||||||||| |||||||| || Sbjct 6556 GGAGGTAGAGGCTTCTGACACTATTGAAAATGTCAAAGCTAAAATTCAAGACAAGGAAGG 6615 Query 27510 AATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC 27569 |||||||||||| ||||||||| | ||||| ||||| || ||| | || |||| ||||| Sbjct 6616 AATTCCTCCAGATCAGCAGCGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGACGTAC 6675 Query 27570 CCTAGCAGACTATAATGTCCA-AAAGG 27595 || | ||||| || |||| ||||| Sbjct 6676 TCTGTCTGACTACAACATCCAGAAAGG 6702 >seq353 Length=45490 Score = 113 bits (124), Expect = 5e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24723 TTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAG 24782 || ||||||||| || |||| ||| ||| ||||||||||| || ||| ||| Sbjct 10410 TTCTATCAGGCGTCCACCTCTGAGCTGTACGGCCTGGTGCAGGAGATCCCGCAGAAAGAG 10469 Query 24783 ACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATA 24842 ||||| || || || || || ||||||| ||| |||| ||| ||| |||||||| Sbjct 10470 ACCACGCCGTTCTACCCTCGCTCACCGTATGCGGTGGCAAAACTGTACGCCTACTGGATC 10529 Query 24843 ACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCAACCAT 24902 ||| |||||||||||| || | || || || || || ||||| |||||||||||||| Sbjct 10530 ACCGTGAACTACCGTGAATCCTACGGCATGTACGCCTGTAACGGCATTCTGTTCAACCAC 10589 Query 24903 GAGTC 24907 || || Sbjct 10590 GAATC 10594 >seq2246 Length=30680 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 80956 ATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCG 81015 ||||| |||||||||||| || || |||||||| | | |||||||| || Sbjct 27116 ATTTCAGTGCACAAATTACTGCTTTTTATGGTACCCAGATGCTGGTGGTTTGATTTACGA 27057 Query 81016 TTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATG 81075 |||||| || |||||| ||||||||| || || || ||||| ||||||||||| || Sbjct 27056 TTGCAATGATCTTTGTAGACCATGTACGGAGTGCCTGTTTCGACTTGTGACTTGAGTATC 26997 Query 81076 GCGTCCCAAATCTCGCGCGCCTTGAC 81101 || ||| || || ||||||| ||| Sbjct 26996 GCCATCCAGATATCACGCGCCTCGAC 26971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570245127974720