Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq4162 156 3e-33 seq3638 156 3e-33 >seq4162 Length=60589 Score = 156 bits (172), Expect = 3e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||||| ||||| ||||||||| ||||| ||||| || || || || Sbjct 57207 AGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGT 57266 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||||||||| || || || | ||| |||||||| || || | || ||| Sbjct 57267 CCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCC 57326 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 |||||| |||||| ||| | | ||| |||||| ||| ||||||| |||| Sbjct 57327 TTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTT 57386 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||||| |||||||| ||||| || ||||| |||||| Sbjct 57387 ATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCATG 57425 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||||| || |||||||||||| ||| || || |||||||| || || Sbjct 57425 GCCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGA 57484 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | |||| |||| || ||||||||||| || || || | |||||| ||||| || || Sbjct 57485 CAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 57544 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCT-TCGCTCTCCA 34657 | |||||||||||| ||||| ||| | | || |||||| ||| |||| Sbjct 57545 AATTCCCTCCTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCT-TCCA 57603 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || | ||||| ||||| || || | || ||||| || |||||||| || Sbjct 57604 CCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 57655 >seq3638 Length=67878 Score = 156 bits (172), Expect = 3e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||||| ||||| ||||||||| ||||| ||||| || || || || Sbjct 11858 AGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGAGAGGGTACGT 11917 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||||||||| || || || | ||| |||||||| || || | || ||| Sbjct 11918 CCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCC 11977 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 |||||| |||||| ||| | | ||| |||||| ||| ||||||| |||| Sbjct 11978 TTGTCTTGGATCTTGGCTTTCACATTTTCAATAGTGTCTGAAGCCTCGACTTCCAAGGTT 12037 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||||| |||||||| ||||| || ||||| |||||| Sbjct 12038 ATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCATG 12076 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||||| || |||||||||||| ||| || || |||||||| || || Sbjct 12076 GCCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGA 12135 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | |||| |||| || ||||||||||| || || || | |||||| ||||| || || Sbjct 12136 CAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 12195 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCT-TCGCTCTCCA 34657 | |||||||||||| ||||| ||| | | || |||||| ||| |||| Sbjct 12196 AATTCCCTCCTTGTCCTGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCT-TCCA 12254 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || | ||||| ||||| || || | || ||||| || |||||||| || Sbjct 12255 CCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 12306 Score = 114 bits (126), Expect = 8e-21 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||| ||||| || || ||| || || || ||||| || || ||| Sbjct 11252 CCACCACGAAGACGCAAGACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAA 11311 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | || || ||||||||||| || || || | ||| |||||||| || || Sbjct 11312 AGAGTTCTTCCATCCTCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGA 11371 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657 | || || |||||| ||| ||| | || ||| | ||| ||||| ||| |||| Sbjct 11372 ATACCTTCTTTGTCT-TGAATTTTGGCCTTGACGTTCTCAATGGTGTCGGAAGCT-TCCA 11429 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| ||| || ||||||||||| || || || || || |||||||| Sbjct 11430 CCTCCAGGGTGATGGTTTTACCGGTCAATGTCTTGACGAAGATCTGCAT 11478 Score = 109 bits (120), Expect = 3e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| ||||| || || ||| |||||| || |||||||| || || || |||| Sbjct 11033 AGACGCAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGAGTTCTT 11092 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || |||||||| || || || | |||||||||||| || || | |||||| Sbjct 11093 CCATCCTCGAGCTGTTTACCCGCGAAGATAAGACGCTGTTGGTCTGGAGGGATTCCCTCT 11152 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | || || ||| ||| ||||| | ||| Sbjct 11153 TTGTCCTGGATC-TTAGCCTTGACGTTCTCGATGGTATCTGAAGCCTCAACTTCGAGGGT 11211 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||||||| || | || || || || |||||||| Sbjct 11212 GATGGTTTTACCAGTCAGAGTCTTGACGAAGATCTGCAT 11250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314694479717348