Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq328 98.7 4e-16 seq356 95.1 5e-15 >seq328 Length=46563 Score = 98.7 bits (108), Expect = 4e-16 Identities = 221/332 (67%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 7276 AGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTAC 7335 ||||| || ||||| || ||||| || ||||| | || ||||||||| |||||| Sbjct 31569 AGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTAC 31510 Query 7336 ATGCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGAC 7395 ||||| | || || || ||||||| || || || || ||| |||| || Sbjct 31509 ATGCCGAGTGGTGGCGCAGTTGCCAACATTACGCTGGCTACGTCCGAATCCTGGCGTGAT 31450 Query 7396 AAGCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGC 7455 || |||||| || | || | | || | |||||||| ||| | || || Sbjct 31449 AAAGCGACCGGTGAGATGAAAGAGCAGACTGAATGGCACCGCGTTGTGCTGTTTGGCAAA 31390 Query 7456 CTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGC 7515 ||||| || | ||||| || || ||||| |||||||| |||||||| |||||||| Sbjct 31389 CTGGCTGAAGTGGCCGGTGAATATCTGCGTAAGGGTTCTCAGGTCTATATCGAAGGCCAG 31330 Query 7516 CTGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATC 7575 ||||| |||||||| ||| | |||| |||| || |||||||| || || | Sbjct 31329 CTGCGTACCCGCAAATGGACCGATCAGTCCGGCGCCGAGAAGTACACCACTGAAGTGGTG 31270 Query 7576 GTCGACATGCACGGACAGATGCAGATGCTTGG 7607 || || | ||| ||||||||||| || Sbjct 31269 GTAAACGTTGGCGGCACCATGCAGATGCTGGG 31238 >seq356 Length=90444 Score = 95.1 bits (104), Expect = 5e-15 Identities = 227/339 (67%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 29421 CCATGCACGAACGCGCGCCCGAGCAGCGGCACCTGATCGACGGGCTCGATGGTACGCAGG 29480 ||| |||| |||| ||| | |||||||||| | || |||| |||||| || | Sbjct 59579 CCAAGCACAAACGGACGCTCCAGCAGCGGCAGTTCTCCGCGTGGCTGGATGGTGCGTAAA 59520 Query 29481 TCGCCCTCCGGCCAGCTCAGGATGTGCCAAGTCAGGCCCGAGGCGTTGCA---CATCGCG 29537 || |||||||||||||||| ||||||||| | || | |||||||| ||| ||| Sbjct 59519 TCCCCCTCCGGCCAGCTCACGATGTGCCACGGCA-----AAAGCGTTGCATCGCATTGCG 59465 Query 29538 ACATCTGCGG--CACTCGGTCGGCTGGTGGCATCGGGGTGGCTATGCACCACGGCGACGA 29595 | | | | | |||||| | | |||||||| ||||| || || | | ||||| | Sbjct 59464 CTTTATCCAGTTCGCTCGGTTGCGTCGTGGCATCAGGGTGACTGTGAGCTATGGCGATCA 59405 Query 29596 TCTCTCCCTGGTCCTCTGCCTCTGCATACGCCTCCGGCGCGATGCGGAACTCCT-CGCCG 29654 | |||| |||||| || |||| || |||| |||| || | |||| | | || || Sbjct 59404 CCGTTCCCCAGTCCTCAGCAGCTGCGTAATCCTCTGGCGAGAGGTGGAAATGTTCCGTCG 59345 Query 29655 GCGTCGGCAGCGGTGTTTTCGCAGGGAACGTATCGCTGGCTCCGGCCAGAACGGATGATC 29714 || || |||||| ||| || || | ||||| | |||| | | | | Sbjct 59344 GC-TCTGCAGCGAGGTTACGACAAGGGAAATATCGTTCAACACGGCTTTTCTGCACCACC 59286 Query 29715 AGTCCGCAGCACTCGCGCGGATACTCTGCCGCAGCGTGC 29753 | || |||||||| || ||||| ||||| ||||| ||| Sbjct 59285 ACGCCACAGCACTCTCGAGGATATTCTGCTGCAGCATGC 59247 Score = 82.4 bits (90), Expect = 3e-11 Identities = 84/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 24313 TGAACTGCTCTGCGCTGAACTCGACGTACAGCAGGGCCGTGTTCGGGTAGCGCAGCTTCG 24372 ||||||| || | ||| |||| ||| ||||| || ||||||||||||||||| || | Sbjct 61683 TGAACTGGCTTGAGTCGAATTCGATGTAGAGCAGCGCGGTGTTCGGGTAGCGCAGTTTGG 61624 Query 24373 CGTCGATCACCTCGGTGTAGC-CGGCGATCAGCATGGTGTCGGCGAT 24418 |||| |||||||||||| ||| | || | | ||| |||||| |||| Sbjct 61623 CGTCAATCACCTCGGTGAAGCTCTGC-AGCGTCATCGTGTCGCCGAT 61578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194798017795432