Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_028685.1 Length=62851 Score E Sequences producing significant alignments: (Bits) Value seq7819 297 8e-76 seq300 212 3e-50 seq356 122 3e-23 seq7820 114 5e-21 >seq7819 Length=39659 Score = 297 bits (328), Expect = 8e-76 Identities = 350/472 (74%), Gaps = 9/472 (2%) Strand=Plus/Plus Query 30153 GGGGCTTCTGCGCCTGAAATCCTGGATCAGTTTCTGGATGAAAAAGAAGGTAACCACACC 30212 || ||||| || || |||| || || |||||| ||||||| ||||| || || Sbjct 10087 GGCGCTTCGGCCCCAAAAATTCTCGACCAGTTTTTGGATGAGAAAGAGGGGAATAGTCTT 10146 Query 30213 ACGGCATACCGTGATAGTGCGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGAT 30272 || || ||| ||| | || |||||||| || |||||||| ||||| ||| ||| Sbjct 10147 ACTGCGTACAAGGATGGAAGTGGCATCTGGACGATTTGCCGTGGTGCCACAATGGTTGAT 10206 Query 30273 GGTAAGCCTGTTATTCCTGGCATGAAGCTGTCGAAGGAAAAATGCGACCGGGTTAACGCC 30332 |||||| | ||| | | ||||||||| | || ||| |||||||||| |||||| ||| Sbjct 10207 GGTAAGTCAGTTGTGCAGGGCATGAAGTTAACGCAGGCAAAATGCGACAAGGTTAATGCC 10266 Query 30333 ATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCACTGACTGAA 30392 || || || |||||||| ||||| ||||| || || |||||||| || ||||| ||| Sbjct 10267 ATCGAACGGGATAAGGCTCTGGCGTGGGTTGACCGCAATATCAAAGTTCCTCTGACCGAA 10326 Query 30393 CCCCAGAAAGCGGGGATCGCGTCATTCTGCCCGTATAACATTGGCCCCGGTAAGTGTTTC 30452 || || ||||| || ||||| || ||||||||||| ||||| ||||| || || || ||| Sbjct 10327 CCTCAAAAAGCCGGAATCGCATCTTTCTGCCCGTACAACATAGGCCCAGGCAACTGCTTC 10386 Query 30453 CCGTCGACGTTTTATAAACGAATTAATGCAGGCGATCGCCGGGGTGCATGCGAGGCGATT 30512 || |||||||| ||||| || ||||||| ||||| ||| || || ||||||||||| Sbjct 10387 CCATCGACGTTCTATAAGCGTCTTAATGCTGGCGACCGCAAAGGGGCCTGCGAGGCGATA 10446 Query 30513 CGCTGGTGGATTAAAGACGGTGGCAGAGACTGCCG--TATC---CGCTCA----AATAAC 30563 || |||||||| ||||| |||||| | |||||||| || | | ||| ||| Sbjct 10447 CGATGGTGGATAAAAGATGGTGGCCGTGACTGCCGACTAACAAAGGGTCAGAAGAATGGG 10506 Query 30564 TGTTATGGTCAGGTATCCCGTCGCGACCAGGAGAGTGCGCTGGCGTGCTGGG 30615 || || || ||||| || || |||||||| |||||||| || ||||||| Sbjct 10507 TGCTACGGGCAGGTTGAACGCCGTGACCAGGAAAGTGCGCTTGCCTGCTGGG 10558 >seq300 Length=47897 Score = 212 bits (234), Expect = 3e-50 Identities = 234/310 (75%), Gaps = 9/310 (3%) Strand=Plus/Minus Query 30323 GGTTAACGCCATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCC 30382 ||||||||| ||||| || |||||||| | || ||||| || || ||||||||||| Sbjct 11071 GGTTAACGCTATTGAACGCGATAAGGCATTAGCCTGGGTTGACCGCAATATCAAAGTGCC 11012 Query 30383 ACTGACTGAACCCCAGAAAGCGGGGATCGCGTCATTCTGCCCGTATAACATTGGCCCCGG 30442 ||||| || || ||||| | || || || || ||||||||||||||||| |||||||| Sbjct 11011 TCTGACAGAGCCACAGAAGGTAGGTATTGCATCCTTCTGCCCGTATAACATCGGCCCCGG 10952 Query 30443 TAAGTGTTTCCCGTCGACGTTTTATAAACGAATTAATGCAGGCGATCGCCGGGGTGCATG 30502 ||| || || || ||||| || ||| || || |||||||| || ||| |||||||| Sbjct 10951 TAAATGCTTACCCTCGACATTCTATCGGCGCATCAATGCAGGTGACCGCATCGGTGCATG 10892 Query 30503 CGAGGCGATTCGCTGGTGGATTAAAGACGGTGGCAGAGACTGCCGTAT--CC---GCTCA 30557 ||| || || |||||||||||||| |||||||| |||| |||||| | || | || Sbjct 10891 CGAAGCAATCCGCTGGTGGATTAAGGACGGTGGACGAGATTGCCGTCTGACCAAAGGCCA 10832 Query 30558 ----AATAACTGTTATGGTCAGGTATCCCGTCGCGACCAGGAGAGTGCGCTGGCGTGCTG 30613 ||| ||| ||||||||||| || || || ||||| || || ||||| ||||| Sbjct 10831 GAAGAATGGCTGCTATGGTCAGGTGGAACGACGTGATCAGGAAAGCGCTCTGGCATGCTG 10772 Query 30614 GGGAATCGAC 30623 ||| || ||| Sbjct 10771 GGGGATAGAC 10762 >seq356 Length=90444 Score = 122 bits (134), Expect = 3e-23 Identities = 368/566 (65%), Gaps = 17/566 (3%) Strand=Plus/Plus Query 19151 GCCACGCAAAAATCGCCATCCTCGATTTCCCGTTCAGGGTCAACGAGTATCAGCATACCT 19210 || || || ||||| ||| || | ||| ||||||| || | |||||| ||||| || Sbjct 33528 GCAACACAGAAATCACCAGGATCAACATCCTGTTCAGGATCTATGAGTATGAGCATTCCC 33587 Query 19211 TCAGGGAAGCTGGGTTTACCACCCTGCGGTGCGGTCATTGAATGCCCCTTGACCTCCAGC 19270 ||||| ||||| ||||| | || | || || ||||| ||||| || ||||| ||| Sbjct 33588 TCAGGAAAGCTCGGTTTTACTCCTGGAGGCGCAGTCATCGAATGACCTGATACCTCAAGC 33647 Query 19271 CAGAACGACCTGTCACTGGCTTTTGTGGTGGTGGAGATCCATTTAATCGCATCTTTTGCG 19330 || || | |||||| ||||| ||||| || | ||||| |||| || | | Sbjct 33648 CAAAAGGCGGAGTCACTAGCTTTAACAGTGGTTGAAACCCATTCCTTCGCGTCGCGTTCT 33707 Query 19331 GTGTACGAAATATCATCCATTGAGAATGCGCCAGCTTGTACGCAGGAGAGTAACGGATAT 19390 ||||| || || | | |||| ||| |||||||| || | |||||| || Sbjct 33708 GTGTATGAGCTAACGGGGC---AAAATGAGCCCGCTTGTACTTCGGTTAATAACGGGTAC 33764 Query 19391 TCGTAAGCGGGGACACGAGTTAATGGCTCTTCAATT-GCGAGCGCC------ATTTCTGC 19443 || || | | | || | | | ||||| || || | |||| || ||| Sbjct 33765 TCATACACAGAG----GATTGATT---TCTTCCGTTCGCTATCGCCTCAAACATAGCTGA 33817 Query 19444 AATAGATTTTGCCAGGCTGGGACTGAAATCTCCGACCTTTACATTCAGTATCTTAGCAAG 19503 ||| ||| ||| || |||||||| |||| ||||| || || ||||| | Sbjct 33818 AATTTCAGCTGCAAGGGATGGGCTGAAATCATCGACTTTTACTCCGAGAATTTTAGCGAA 33877 Query 19504 CTGTGCTGCGTGGCTGGCATTTATGGCGTTGATGCCAGCCATTAGCTGATTAACAGCGCT 19563 |||||| || || | || || || ||||| |||| || || ||| |||| | || Sbjct 33878 CTGTGCGGCATGAGTAGCGTTGATAGCGTTTGTGCCGTTCAGTAACTGCGCAACACCACT 33937 Query 19564 TTGGGTAACACCTAATTCATAGGCTAATGATTCCTGCGACAGGCCTAACTCTTTCTTTTT 19623 ||| | || | || | || || | ||||| || || || | | |||| || || Sbjct 33938 TTGCCCCATCCCCATTTGTTCAGCCAAAGTCTCCTGTGAGAGCCCCAGCACTTTTTTCTT 33997 Query 19624 AGCGTTAAAAATACTTTTCAGACGCTTGGCGTCTTCCAGTTGCTCAGGGGTTAACGGTTT 19683 | | ||||||| |||||| | ||||| || | ||||| || | ||| || ||||| Sbjct 33998 GGACTCAAAAATAGCTTTCAGCCTGTTGGCATCAGCAAGTTGTTCGGCGGTCAATGGTTT 34057 Query 19684 CTTTTTCATGTTCATACCATATCACC 19709 ||||||||| ||||| ||||||| Sbjct 34058 CTTTTTCATTCTCATAATTTATCACC 34083 >seq7820 Length=47423 Score = 114 bits (126), Expect = 5e-21 Identities = 87/103 (84%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 14467 TGAAATAGCAGTCTTCCAGTTTTTCGAACACTTCCCACGCCCGATCGGTTTCGAGCATTT 14526 ||||||| || ||||||||||||||||| |||||||| || | || | ||| ||||||| Sbjct 29300 TGAAATAACAATCTTCCAGTTTTTCGAATACTTCCCAAGCTTGGTCTGATTCCAGCATTT 29359 Query 14527 TTGCGTGACGGGCTGCGCCGCGTTCTGTCCAGAGGATGAGGGA 14569 |||| || || || ||||| || |||||||||||||||||||| Sbjct 29360 TTGCATGGCGAGCAGCGCCTCGCTCTGTCCAGAGGATGAGGGA 29402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200975970839792