Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_029120.1 Length=60875 Score E Sequences producing significant alignments: (Bits) Value seq7819 306 1e-78 seq300 221 5e-53 seq7820 116 1e-21 >seq7819 Length=39659 Score = 306 bits (338), Expect = 1e-78 Identities = 353/472 (75%), Gaps = 9/472 (2%) Strand=Plus/Plus Query 25536 GGTGCTTCTGCGCCTGAAATCCTCGACCAGTTTCTGGATGAAAAGGAAGGTAACCACACC 25595 || ||||| || || |||| |||||||||||| ||||||| || || || || Sbjct 10087 GGCGCTTCGGCCCCAAAAATTCTCGACCAGTTTTTGGATGAGAAAGAGGGGAATAGTCTT 10146 Query 25596 ACGGCATACCGTGATGGTGTGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGAT 25655 || || ||| ||||| || |||||||| || |||||||| ||||| ||| ||| Sbjct 10147 ACTGCGTACAAGGATGGAAGTGGCATCTGGACGATTTGCCGTGGTGCCACAATGGTTGAT 10206 Query 25656 GGTAAGCCTGTGATTCCTGGCATGAAGCTGTCGAAGGAAAAATGCGACCGGGTTAACGCT 25715 |||||| | || | | ||||||||| | || ||| |||||||||| |||||| || Sbjct 10207 GGTAAGTCAGTTGTGCAGGGCATGAAGTTAACGCAGGCAAAATGCGACAAGGTTAATGCC 10266 Query 25716 ATCGAACGGGATAAGGCGCTGGCATGGGTGGCGAAGAACATCAGAGTGCCACTGACTGAA 25775 ||||||||||||||||| ||||| ||||| | || |||| ||| || ||||| ||| Sbjct 10267 ATCGAACGGGATAAGGCTCTGGCGTGGGTTGACCGCAATATCAAAGTTCCTCTGACCGAA 10326 Query 25776 CCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAACATTGGCCCCGGTAAGTGTTTC 25835 || || ||||| || || || || ||||| || |||||||| ||||| || || || ||| Sbjct 10327 CCTCAAAAAGCCGGAATCGCATCTTTCTGCCCGTACAACATAGGCCCAGGCAACTGCTTC 10386 Query 25836 CCGTCGACGTTTTATAAACGAATTAATGCAGGTGATCGAAAAGGTGCCTGCGAAGCGATT 25895 || |||||||| ||||| || ||||||| || || || ||||| |||||||| ||||| Sbjct 10387 CCATCGACGTTCTATAAGCGTCTTAATGCTGGCGACCGCAAAGGGGCCTGCGAGGCGATA 10446 Query 25896 CGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCG--TATC---CGCTCA-AATAAT--- 25946 || |||||||| || || |||||| | |||||||| || | | ||| || ||| Sbjct 10447 CGATGGTGGATAAAAGATGGTGGCCGTGACTGCCGACTAACAAAGGGTCAGAAGAATGGG 10506 Query 25947 TGCTACGGTCAGGTATCAAGACGTGACCAGGAGAGTGCGCTGTCATGCTGGG 25998 |||||||| ||||| | | ||||||||||| |||||||| | ||||||| Sbjct 10507 TGCTACGGGCAGGTTGAACGCCGTGACCAGGAAAGTGCGCTTGCCTGCTGGG 10558 >seq300 Length=47897 Score = 221 bits (244), Expect = 5e-53 Identities = 236/310 (76%), Gaps = 9/310 (3%) Strand=Plus/Minus Query 25706 GGTTAACGCTATCGAACGGGATAAGGCGCTGGCATGGGTGGCGAAGAACATCAGAGTGCC 25765 |||||||||||| ||||| |||||||| | || ||||| | || |||| |||||| Sbjct 11071 GGTTAACGCTATTGAACGCGATAAGGCATTAGCCTGGGTTGACCGCAATATCAAAGTGCC 11012 Query 25766 ACTGACTGAACCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAACATTGGCCCCGG 25825 ||||| || || ||||| | |||||||| || ||||| || || ||||| |||||||| Sbjct 11011 TCTGACAGAGCCACAGAAGGTAGGTATTGCATCCTTCTGCCCGTATAACATCGGCCCCGG 10952 Query 25826 TAAGTGTTTCCCGTCGACGTTTTATAAACGAATTAATGCAGGTGATCGAAAAGGTGCCTG 25885 ||| || || || ||||| || ||| || || ||||||||||| || | ||||| || Sbjct 10951 TAAATGCTTACCCTCGACATTCTATCGGCGCATCAATGCAGGTGACCGCATCGGTGCATG 10892 Query 25886 CGAAGCGATTCGCTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTAT--CC----GCTC 25939 |||||| || ||||||||||||||||||||||| |||| |||||| | || || Sbjct 10891 CGAAGCAATCCGCTGGTGGATTAAGGACGGTGGACGAGATTGCCGTCTGACCAAAGGCCA 10832 Query 25940 AAATAAT---TGCTACGGTCAGGTATCAAGACGTGACCAGGAGAGTGCGCTGTCATGCTG 25996 || ||| ||||| |||||||| | ||||||| ||||| || || ||| ||||||| Sbjct 10831 GAAGAATGGCTGCTATGGTCAGGTGGAACGACGTGATCAGGAAAGCGCTCTGGCATGCTG 10772 Query 25997 GGGTATCGAC 26006 ||| || ||| Sbjct 10771 GGGGATAGAC 10762 >seq7820 Length=47423 Score = 116 bits (128), Expect = 1e-21 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 17296 TCCCTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCACGCAAAAATGCTCGAAACTGAT 17355 |||||||||||||||||||| || || || || || || ||||||||||| ||| | || Sbjct 29402 TCCCTCATCCTCTGGACAGAGCGAGGCGCTGCTCGCCATGCAAAAATGCTGGAATCAGAC 29343 Query 17356 CAGGCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTATTTCAGCCA 17402 || || |||||||| ||||||||||||||||| || ||||||| ||| Sbjct 29342 CAAGCTTGGGAAGTATTCGAAAAACTGGAAGATTGTTATTTCAACCA 29296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194657233104264