Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq4162 82.4 5e-11 seq3638 82.4 5e-11 >seq4162 Length=60589 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || |||||| | || || ||| || || | || ||||| | Sbjct 57424 ATGCAAATTTTCGTAAAAACTTTAACCGGAAAAACGATAACCTTGGAAGTCGAGGCTTCA 57365 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| | | || || ||| || || ||||| |||||| | || || || Sbjct 57364 GACACTATTGAAAATGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAA 57305 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| | || || || || |||||| | || || | ||| | | | || ||||||||| Sbjct 57304 CAACGTCTCATCTTCGCTGGTAAACAACTAGAAGATGGACGTACCCTCTCTGATTACAAC 57245 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||| ||| ||| | ||||||||| ||||| | ||||| ||| Sbjct 57244 ATCCAAAAGGAGTCAACTCTTCATTTGGTTCTGCGTCTCCGTGGTGGC 57197 >seq3638 Length=67878 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || |||||| | || || ||| || || | || ||||| | Sbjct 12075 ATGCAAATTTTCGTAAAAACTTTAACCGGAAAAACGATAACCTTGGAAGTCGAGGCTTCA 12016 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| | | || || ||| || || ||||| |||||| | || || || Sbjct 12015 GACACTATTGAAAATGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCACCAGACCAA 11956 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| | || || || || |||||| | || || | ||| | | | || ||||||||| Sbjct 11955 CAACGTCTCATCTTCGCTGGTAAACAACTAGAAGATGGACGTACCCTCTCTGATTACAAC 11896 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||| ||| ||| | ||||||||| ||||| | ||||| ||| Sbjct 11895 ATCCAAAAGGAGTCAACTCTTCATTTGGTTCTGCGTCTCCGTGGTGGC 11848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355822689759612