Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq343 140 5e-28 >seq343 Length=93066 Score = 140 bits (154), Expect = 5e-28 Identities = 180/246 (73%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 202498 CAGTATCTCCAACTGATGGAATCCGTCCTCTCATTCGGTCATGAAAAGAAA-GACCGTAC 202556 |||||||| || ||||| || || ||| || || || | || ||| ||||| || Sbjct 7251 CAGTATCTTGAATTGATGAAAAAAGTGCTCG-ATGAGGGCACGCCAAAAAATGACCGCAC 7309 Query 202557 CGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACCGAAGGCTT 202616 ||||||||| |||| ||| | || || ||||||||| || ||||| ||||| || Sbjct 7310 CGGCACCGGGACGCTCTCTATTTTTGGCCACCAGATGCGCTTCAACCTGCAGGAAGGTTT 7369 Query 202617 CCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTGCTGTGGTT 202676 ||| |||||||| ||||| || || || || |||||||| || ||||| ||||| Sbjct 7370 CCCTCTGGTGACGACGAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTGCTCTGGTT 7429 Query 202677 CCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATCTGGGACGA 202736 |||| |||| ||||||||| | || ||| |||| ||| ||| | ||||||||||| Sbjct 7430 CCTGCAAGGCGACACCAACGTAGCGTATCTGCACGAAAACAACGTCTCCATCTGGGACGA 7489 Query 202737 ATGGGC 202742 |||||| Sbjct 7490 ATGGGC 7495 Score = 111 bits (122), Expect = 2e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 202953 TGGCGAACTCGGCCCAGTATACGGAAAACAGTGGCGGGATTGGGTTGGTGCAGATGGTCG 203012 |||| | ||||| || || ||||| || |||||||||| ||| | | || || || Sbjct 7505 TGGCAACCTCGGGCCGGTTTACGGCAAGCAGTGGCGGGCATGGCCTACCCCTGACGGCCG 7564 Query 203013 GCATCATGACCAAATCACCAAAGTCATCGACCAGCTGCGTAACGATCCGGATAACCGCCG 203072 ||| ||||| ||||||| || || |||||||| ||||||||||| ||||| Sbjct 7565 CCATATCGACCAGATCACCACCGTAATGAACCAGCTGAAAAACGATCCGGACTCGCGCCG 7624 Query 203073 CATTATTGTCAGCGCATGGAATGTCGGTGAGTTGGACCAGATGGCGTTAGCACCGTGTCA 203132 ||||| || || ||||| || ||||| ||||| | |||||| | |||||||| || Sbjct 7625 TATTATCGTTTCTGCCTGGAACGTGGGTGAACTGGACAAAATGGCGCTGGCACCGTGCCA 7684 Query 203133 TTCTTTCTTCCAGTTCTAT 203151 | || |||||||||||| Sbjct 7685 CGCGTTTTTCCAGTTCTAT 7703 Score = 104 bits (114), Expect = 4e-17 Identities = 213/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || || || ||| | ||||||||| | ||| || ||| | ||| |||||||||||||| Sbjct 7719 CTCTCCTGCCAGCTTTATCAGCGCTCCTGCGACGTGTTCCTCGGCCTGCCGTTTAACATC 7778 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409 ||| || || | || | ||| | || |||||| | | ||| | | || Sbjct 7779 GCCAGCTACGCGCTGCTTGTGCACATGATGGCGCAGCAGTGCGATCTGGACGTGGGTGAT 7838 Query 203410 TTCGTCTGGACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTCTG 203469 || |||||||| ||||| || || || ||||| |||||| |||| || | | ||| Sbjct 7839 TTTGTCTGGACGGGCGGGGACACCCACCTGTACAGCAACCACATGGATCAAACGCATCTT 7898 Query 203470 CAGTTAACTCGTGACCCGCACCCATTACCGCGTCTGAAATTCAAACGTAAGCCCGAGTCT 203529 || | | || || |||| | || ||| ||| ||||||| || || || || Sbjct 7899 CAACTGAGCCGCGAACCGCGTGCGTTGCCGAAACTGGTTATCAAACGCAAACCTGAATCG 7958 Query 203530 ATCTTCGACTACCAGTTCGAAGACTTTGAAATCGAAGGCTACGTTTCCCACGACGCCATC 203589 |||||||| || | ||||| || || || || ||||| |||| | ||| | ||| Sbjct 7959 ATCTTCGATTATCGTTTCGACGATTTCGAGATTGAAGGTTACGACCCGCACCCGGGTATC 8018 Query 203590 AAAGCACCGGTTGCCAT 203606 ||||| |||||||| || Sbjct 8019 AAAGCCCCGGTTGCAAT 8035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788229776776000