Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq8198 194 4e-45 seq328 170 5e-38 seq340 125 2e-24 seq347 104 6e-18 >seq8198 Length=2870 Score = 194 bits (214), Expect = 4e-45 Identities = 200/262 (76%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 38557 CCACGCTGAATGGTCACAGGAAGCGTTTGGCGACGTTGGCCCTGTTGGACCACTGAAACA 38616 |||||||||||||||| | | | || ||| | || ||||| ||||||| |||||||| Sbjct 2041 CCACGCTGAATGGTCAGAAAAGACCTTCGGCAATGTCGGCCCCATTGGACCGCTGAAACA 1982 Query 38617 CCTGTCAATAGAAGCGCTGGAAGCCGCAGCAGCGCCAGGCGACCTTTCTGAATGGGCTGA 38676 ||| || | ||| ||||||||||| || || || || |||||||| ||||||||||| Sbjct 1981 CCTTTCCAAAGAGGCGCTGGAAGCTGCCGCCGCTCCTGGCGACCTCAGCGAATGGGCTGA 1922 Query 38677 CATGCAATTCCTGCTGTGGGATGCGCAGCGCCGTGCTGGCATCACTGACGAGCAAATTAC 38736 ||||| |||||||| ||||| || ||||| || || || ||||| || |||||||| || Sbjct 1921 TATGCAGTTCCTGCTATGGGACGCACAGCGGCGCGCCGGTATCACCGATGAGCAAATCAC 1862 Query 38737 GCAGGCCATGATTGATAAGCTGGCAGTGAACAAAGCGCGCACCTGGCAGGAACCTAAAGA 38796 ||| || || |||||| || |||| | ||| ||||| |||||| ||||| Sbjct 1861 CGCGGCGCTGGAAGAAAAGCTGAAGGTAAACATGACCCGCCACTGGCCGGAACCGAAAGA 1802 Query 38797 CGGAGAACCGCGCCTGCACATC 38818 ||| || |||||||| |||||| Sbjct 1801 CGGTGAGCCGCGCCTTCACATC 1780 >seq328 Length=46563 Score = 170 bits (188), Expect = 5e-38 Identities = 210/287 (73%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 26929 TTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCC 26988 |||||||||||| ||| |||| |||||| |||||||| ||||| ||||| ||| Sbjct 31276 TTCAGTGGTGTACTTCTCGGCGCCGGACTGATCGGTCCATTTGCGGGTACGCAGCTGGCC 31335 Query 26989 TTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCC 27048 ||| || | |||| || || ||||| |||||||| || | ||| ||||| ||||| Sbjct 31336 TTCGATATAGACCTGAGAACCCTTACGCAGATATTCACCGGCCACTTCAGCCAGTTTGCC 31395 Query 27049 GAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTT 27108 || | ||||||||||||||||| ||||||||||| || || || || ||||| Sbjct 31396 AAACAGCACAACGCGGTGCCATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTATCACG 31455 Query 27109 CCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAGCG 27168 ||| ||||| || || | | | ||||||||||||||||| |||||||||||| Sbjct 31456 CCAGGATTCGGACGTAGCCAGCGTAATGTTGGCAACTGCGCCACCACTCGGCATGTAGCG 31515 Query 27169 CACTTCTGGATCGTTGCCTAAATTACCGATTAACTGCACCTGGTTTA 27215 ||||| || || | ||| | |||||||| | ||||| ||||| Sbjct 31516 TACTTCCGGGTCCTGGCCCAGATTACCGACGAGAATCACCTTGTTTA 31562 >seq340 Length=80703 Score = 125 bits (138), Expect = 2e-24 Identities = 233/342 (68%), Gaps = 0/342 (0%) Strand=Plus/Plus Query 10096 CGCTTATCGTGAATTGCTGATGCGTCAGCGCGTCAACGAGGCTGCAAAAGCCGTCATGCT 10155 ||| ||||| ||| | | |||||||||||| |||||||| || || |||||||| Sbjct 4107 CGCGTATCGGGAAGTTATCTGGCGTCAGCGCGTTAACGAGGCCGCGCGTGCGGTCATGCT 4166 Query 10156 GGCTTACGCTACTGGCGCAGACCTGGACCAGCTTGGCGCTAACGTGGGCGTACAGCGTCA 10215 ||| ||||| | ||| || || |||||| |||| || |||| | | |||||| Sbjct 4167 GGCCTACGCCGCGGGCAGCGATCTCGACCAGATTGGGGCAAACGCTAACCTTGAGCGTCT 4226 Query 10216 GGTCATTACGCCTGCTGATGACACCACCGTGCCGCCAACGCCTGCCTTCATGGAATCAGA 10275 ||| |||||||| || || |||||||| | ||||| ||||| || |||||||||| || Sbjct 4227 GGTGATTACGCCCGCCGACGACACCACGTTCCCGCCCACGCCGGCGGTCATGGAATCCGA 4286 Query 10276 CGAAGATTTCCGCGCACGCATCCAGTTATCACCGGAAGGCTACACCACAGCAGGTTCAGA 10335 ||||| || ||||||||| |||||||||| || | || ||||| Sbjct 4287 TACCGATTTTCGTCTGCGCATCCAGCAGGCACCGGAAGGGCTCAGCGTGGCTGGTTCGAC 4346 Query 10336 AGGTAGCTACGTGTTCCACGGCTTAGGCGCTGATGCTGACGTGAAAGACATTCAGGCCAT 10395 ||| || |||||| ||| |||| |||| | ||| |||||| | || Sbjct 4347 AGGCGCTTATCAGTTCCATGGCCGCAGCGCGGATGGTCGTGTGGCGGACATTTCCGTGAT 4406 Query 10396 CAGCCCGGAACCAGGCAAAGTCACCGTTTACGTGCTGTCACG 10437 ||||| | || | || || || |||| |||||| || || Sbjct 4407 TAGCCCCCAGCCTGCGAACGTTACGGTTTCCGTGCTCTCCCG 4448 >seq347 Length=51193 Score = 104 bits (114), Expect = 6e-18 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 10117 GCGTCAGCGCGTCAACGAGGCTGCAAAAGCCGTCATGCTGGCTTACGCTACTGGCGCAGA 10176 ||| |||||||||||||||||||| || |||||||||||||||||| ||| | || Sbjct 46006 GCGACAGCGCGTCAACGAGGCTGCGCGTGCGGTCATGCTGGCTTACGCTGCTGACAGCGA 45947 Query 10177 CCTGGACCAGCTTGGCGCTAACGTGGGCGTACAGCGTCAGGTCATTACGCCTGCTGATGA 10236 ||| |||||| | |||| || ||| |||| | ||||| ||||||| || || Sbjct 45946 CCTCGACCAGATAGGCGGAAATTACAACGTTGAGCGCCTCGTCATCGCGCCTGCAGACGA 45887 Query 10237 CACCACCGTGCCGCCAACGCCTGCCTTCATGGAATCAGAC 10276 ||| || | ||||| ||||| ||| | ||||| || ||| Sbjct 45886 CACGACGTTTCCGCCCACGCCAGCCGTGATGGAGTCGGAC 45847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134001428775360