Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq356 273 6e-69 seq7820 118 3e-22 >seq356 Length=90444 Score = 273 bits (302), Expect = 6e-69 Identities = 376/521 (72%), Gaps = 6/521 (1%) Strand=Plus/Plus Query 27295 GCCATGAAAGAGTTTGGCATTATCGATCCACAACATCAGGCAATGTTCATTGCCCAGGTC 27354 || ||||||||||| ||||| | | | || | | ||||| ||||||||||| |||| Sbjct 41936 GCGATGAAAGAGTTCGGCATCACCAAGCCGGTAGACCAGGCCATGTTCATTGCGCAGGCT 41995 Query 27355 GGGCATGAAAGCACTGGATTCACCAGGCTGGTGGAGAATTTCAACTACAGCATTTCCGGG 27414 |||||||| || || |||||| |||| ||| || |||||||||||| | ||| Sbjct 41996 GGGCATGAGTCGACAGGGTTCACCCGGCTACAGGAAAACTTCAACTACAGCGTAGTGGGG 42055 Query 27415 CTGTCTGGCTTCATCCGCGCCGGGCGTATAACTCCGGACCAGGCCAGCGCACTT-GGCAG 27473 | | ||||| || || || || || || | |||||||| | | || || ||| | Sbjct 42056 TTAACAAATTTCATTCGTGCGGGACGCATCACACAAGACCAGGCTAAC-CAGTTAGGCCG 42114 Query 27474 GAAAACATATGAGAAGTCTCTTCCCCTGGAACGCCAGCGTGCAATTGCCAATCTGGTGTA 27533 | | | ||| | | || | || || |||||||| ||||| || |||| || Sbjct 42115 CCGACCTGAAGAGCGAGCATTACCGATTGAGCGTCAGCGTGCCATTGCTAACTTGGTCTA 42174 Query 27534 TAGCAAGCGCTACGGTAACAATGCGCCAGGTGATGGATGGAAATACCGTGCGCGTGGACT 27593 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 42175 CAGCAAACGCTACGGTAACAATGCGCCTGGTGATGGATGGAAATACCGTGCGCGTGGGCT 42234 Query 27594 CATCGGAATCACGTTCCTCGATAACTACCGGGATTGTGGAAACGGTCTGAAGGTTGATCT 27653 |||||| ||||||||||| ||||||||||| || || || | | |||||||||||||| Sbjct 42235 CATCGGCATCACGTTCCTGGATAACTACCGTGACTGCGGCATTGCCCTGAAGGTTGATCT 42294 Query 27654 GGT--AGCTAAGCCTGAACTGCTGGCACAGGATGAATACGCGGCCCGCAGCGCGGCGTGG 27711 ||| ||| ||||||| || | || || || || || | |||||||| ||| Sbjct 42295 GGTTCAGC--AGCCTGAGCTATTAGCCGAGCCCATTTATGCAGCAAGGAGCGCGGCATGG 42352 Query 27712 TTCTTCGCCAGTAAAGGTTGCATGAAGTACACCGGCGACATGGTGCGCGTAACGCAGATC 27771 ||||||| | || || || |||| || | | || || ||| |||||| | || Sbjct 42353 TTCTTCGTTACAAAGGGATGTCTGAACTATTCAGATAACCTGCTGCAGGTAACGAAAATT 42412 Query 27772 ATCAATGGCGGGCAGAACGGAATCGACGACCGGCGCGCGCG 27812 ||||||||||| ||||||| | || || || ||||| || Sbjct 42413 ATCAATGGCGGAACGAACGGACTTGAAGATCGTCGCGCTCG 42453 >seq7820 Length=47423 Score = 118 bits (130), Expect = 3e-22 Identities = 156/208 (75%), Gaps = 10/208 (5%) Strand=Plus/Plus Query 21148 ATCACCACCGCTGAGACCAATCAGATGGTGGTGAACTGTGCAGAGTTGGTCTTACCGGCT 21207 |||||||| || |||||||| | ||||||||||||||||| |||||||||||||| Sbjct 29674 ATCACCACTGCCAAGACCAATAGGCGGGTGGTGAACTGTGCAGGATTGGTCTTACCGGC- 29732 Query 21208 ACAAAGGACCCGGCGCACCGTGAGGTGCCCCCACACAGCCCACCATAGAATATGG---GT 21264 | || |||| | | | | | |||||||||||||||||| ||| | || Sbjct 29733 -CTAACCGTCCGGTGAGCTTTTCAGCTCTCCCACACAGCCCACCATA-AATCGCGAATGT 29790 Query 21265 G-CTATGCTTCACGCATaaaaaaaCCGCTCGCGCGGTAATGCGCCTCTGTAGTAATCCGG 21323 | |||||||| |||| ||||||||||||| ||||| ||||| | | ||| ||||| Sbjct 29791 GACTATGCTTAGCGCAAAAAAAAACCGCTCACGCGGCTATGCGTCGAT-TAGGTTTCCGG 29849 Query 21324 GAGACCAATCCCG-GCACTGGATTTTGC 21350 ||||||||||||| | || |||||||| Sbjct 29850 GAGACCAATCCCGATCGCT-GATTTTGC 29876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133495883747984