Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq328 138 3e-28 seq320 109 1e-19 >seq328 Length=46563 Score = 138 bits (152), Expect = 3e-28 Identities = 239/346 (69%), Gaps = 1/346 (0%) Strand=Plus/Plus Query 26637 GCCACCAAGCATTTGCATGGTTCCACCAACGCCAACGATGACTTCGGTAGTGAACCGATC 26696 |||||| ||||| |||||||| || |||||| || | ||||| || ||| || || Sbjct 31234 GCCACCCAGCATCTGCATGGTGCCGCCAACGTTTACCACCACTTCAGTGGTGTACTTCTC 31293 Query 26697 CTGTCTGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGA 26756 | | ||||| |||||| | || |||| | |||||| | ||| |||| ||| Sbjct 31294 GGCGCCGGACTGATCGGTCCATTTGCGGGTACGCAGCTGGCCTTCGATATAGACCTGAGA 31353 Query 26757 ACCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTG 26816 ||| || |||||||| || | ||| | ||| |||||||| || || || || ||||| Sbjct 31354 ACCCTTACGCAGATATTCACCGGCCACTTCAGCCAGTTTGCCAAACAGCACAACGCGGTG 31413 Query 26817 CCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGC 26876 ||| || |||||||| || ||| || || ||||||||||| ||| |||||||| Sbjct 31414 CCATTCAGTCTGCTCTTTCATCTCACCGGTCGCTTTATCACGCCAGGATTCGGACGTAGC 31473 Query 26877 AACTGTAAGGTTTGCAAATGCCGTTCCTGATGGGTGAATATCTGATTTCTGGATCATGCC 26936 | |||| ||| |||| || || | | || || | | ||| || || || | Sbjct 31474 CAGCGTAATGTTGGCAACTG-CGCCACCACTCGGCATGTAGCGTACTTCCGGGTCCTGGC 31532 Query 26937 CAAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 26982 | || ||| | | |||||||| |||||||||||||| ||||| Sbjct 31533 CCAGATTACCGACGAGAATCACCTTGTTTACGCCTCTGCTGGCCAT 31578 >seq320 Length=67307 Score = 109 bits (120), Expect = 1e-19 Identities = 220/323 (68%), Gaps = 4/323 (1%) Strand=Plus/Minus Query 22473 ATCGGCACCAGTTAAATCAAATACTTACG-TATTATTCGTGCCTTCCTTATTTTTACTGT 22531 |||||||||| | ||||||| | ||||| |||| || ||| |||| ||| | | Sbjct 62637 ATCGGCACCATTAAAATCAATAAGTTACGCTATTCTTATTGC--TCCTCCATTTAAGGGG 62580 Query 22532 GG-GACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGTCGAGCATGTTCAGTC 22590 || ||| |||||||||| || | | ||||||| |||||||| | || ||||| | Sbjct 62579 GGAGACCTATTTGGGACGTAACCCCAAGAAATCGAATCAATTTGGCTCGCGTGTTCCTGC 62520 Query 22591 AGGTGATTTGGTGCCAGATGAGCATATCGGCGAACCATTTCGATAGACTCCCAGCCACCC 22650 | | | | | | || ||||| || | ||||| |||| | ||| || || ||| Sbjct 62519 AAACGCCTGGTCGATAAGTGCGCATAACGTTGCACCATATCGAGCGTCTCTCATCCCCCC 62460 Query 22651 ATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAACTTGCCCACGTGTGC 22710 |||| || | || ||| | ||| ||| ||||| | |||||| ||| | |||||| Sbjct 62459 ATTTGCTTGAGAGCCAAAAGAGAAACCCCAATTTGAACAAGCCAACTCGCCTAAGTGTGC 62400 Query 22711 CTCAGGTCATGAAAACGGAAGTCTTCAATGCCCGCTCGTTTTAATGCTGCCCTCCATGCA 22770 | || ||| ||||| | ||| | || || | || || || || || ||||||| Sbjct 62399 CGCAAGTCGTGAAATCTGAAATTCTCGATCCAGGCACGGCGTAGGGCGGCTTTCCATGCC 62340 Query 22771 GTATTAGCGTCATAGCGCATCTT 22793 || |||| |||||||||||| || Sbjct 62339 GTGTTAGAGTCATAGCGCATTTT 62317 Score = 100 bits (110), Expect = 7e-17 Identities = 87/107 (81%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 22376 ATGGGACGTGTGAGCGCAGGTATGACGTGGTATGTTGTTGACTTAAAAGGTAGTTCTTAT 22435 |||| |||||||||||| | | | | |||| ||| || |||||||||| || | Sbjct 56413 ATGGAACGTGTGAGCGC-GACAGAATGCGGTAAGTTACTGTGTTAAAAGGTAATTATGCA 56355 Query 22436 AATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCA 22482 |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 56354 GATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCTCCA 56308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129281941969160