Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cotesia_20vestalis_20[genbank_20GCA_5F000956155.1_202015-03-18] 9,156 sequences; 186,103,588 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4162 118 1e-21 seq3638 118 1e-21 seq7856 86.0 6e-12 >seq4162 Length=60589 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || | ||| || ||| ||| ||||| |||||||||||||| Sbjct 57425 GCCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGA 57484 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| | |||| ||||| || || || ||||| || || ||||| ||||| | || Sbjct 57485 CAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 57544 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||||| ||| | || |||| || | | ||||| | |||| Sbjct 57545 AATTCCCTCCTTGTCC-TGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCA 57603 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | ||||| ||||| || ||||| ||||| ||||| |||||||| || Sbjct 57604 CCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 57655 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || || |||||| || ||||| || || || Sbjct 57197 GCCACCACGGAGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGA 57256 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || | || || || || || || ||||| || || || |||||||| | || Sbjct 57257 GAGGGTACGTCCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGG 57316 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCA 41813 | | |||||||| ||| || |||| || || |||||| | ||| | Sbjct 57317 GATACCTTCCTTGTCTTGGATCTTG-GCTTTCACATTTTCAATAGTGTCTGAAGCCTCGA 57375 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | |||| ||||||||||| || || | || ||||||||||| |||||| Sbjct 57376 CTTCCAAGGTTATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCATG 57425 >seq3638 Length=67878 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || | ||| || ||| ||| ||||| |||||||||||||| Sbjct 12076 GCCTCCACGAAGACGCAGTACTAAATGGAGAGTGGACTCTTTCTGGATGTTATAGTCGGA 12135 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| | |||| ||||| || || || ||||| || || ||||| ||||| | || Sbjct 12136 CAAGGTTCTTCCGTCCTCGAGTTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 12195 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||||| ||| | || |||| || | | ||||| | |||| Sbjct 12196 AATTCCCTCCTTGTCC-TGAATCTTGGCTTTCACATTTTCGATGGTGTCTGATGCTTCCA 12254 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | ||||| ||||| || ||||| ||||| ||||| |||||||| || Sbjct 12255 CCTCTAAAGTTATGGTTTTTCCTGTCAGAGTCTTCACGAAGATCTGCATTTT 12306 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || || ||| ||||||||| ||||||||||||||| Sbjct 11024 CCACCACGGAGACGCAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 11083 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || |||||||| || || ||||| || || ||||||||||| | || Sbjct 11084 AGAGTTCTTCCATCCTCGAGCTGTTTACCCGCGAAGATAAGACGCTGTTGGTCTGGAGGG 11143 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||| |||||| ||| || ||| | | | || || | ||| || Sbjct 11144 ATTCCCTCTTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTATCTGAAGCCTCAACT 11203 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 11204 TCGAGGGTGATGGTTTTACCAGTCAGAGTCTTGACGAAGATCTGCAT 11250 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || || |||||| || ||||| || || || Sbjct 11848 GCCACCACGGAGACGCAGAACCAAATGAAGAGTTGACTCCTTTTGGATGTTGTAATCAGA 11907 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || | || || || || || || ||||| || || || |||||||| | || Sbjct 11908 GAGGGTACGTCCATCTTCTAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGG 11967 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCA 41813 | | |||||||| ||| || |||| || || |||||| | ||| | Sbjct 11968 GATACCTTCCTTGTCTTGGATCTTG-GCTTTCACATTTTCAATAGTGTCTGAAGCCTCGA 12026 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | |||| ||||||||||| || || | || ||||||||||| |||||| Sbjct 12027 CTTCCAAGGTTATCGTTTTTCCGGTTAAAGTTTTTACGAAAATTTGCATG 12076 >seq7856 Length=18030 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 ||||| ||||| ||||| || || || || | || || | || || || ||||| ||| Sbjct 6699 TTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAATTGTTTTCCAGCGAAAATC 6640 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794 | ||||| || || | |||| | |||||||| ||| |||| |||| || | Sbjct 6639 AAACGCTGCTGATCTGGAGGAATTCCTTCCTTGTCT-TGAATTTTAGCTTTGACATTTTC 6581 Query 41795 AC-AGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 | |||||| | ||| ||||||| || || |||||||||||||| ||||| || || Sbjct 6580 AATAGTGTCAGAAGCCTCTACCTCCAAGGTAATGGTTTTACCCGTCAGTGTCTTCACAAA 6521 Query 41854 AATCTGCAT 41862 |||||||| Sbjct 6520 GATCTGCAT 6512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462251089307200