Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2849 98.7 2e-15 >seq2849 Length=471161 Score = 98.7 bits (108), Expect = 2e-15 Identities = 221/325 (68%), Gaps = 8/325 (2%) Strand=Plus/Minus Query 35405 GGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCC 35464 || || || ||||||||||||||||||||||| || || ||||| | || || | Sbjct 134273 GGTCCTGTGTACGGATTCCAATGGCGTCATTTCGGAGCAAAATATAAAACATGCGATGAT 134214 Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAA-AA 35523 ||||| || || | || || || || | || | || |||| | | | ||| || Sbjct 134213 GATTACACCGGCGAAGGGATCGACCAGCTTGCTGAAGTAATAAACCGCATAA-AGACCAA 134155 Query 35524 TCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGC 35583 ||| ||| || | || || |||| || ||||| || |||| ||| | ||||| Sbjct 134154 TCCCACCGATCGACGCATTATCATGAGCGCTTGGAACCCGGTGGACATTCCGCAAATGGC 134095 Query 35584 TCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCC 35642 ||| || ||||||||| || | ||||| || | || | | ||||||||||| |||| Sbjct 134094 TCTACCACCATGCCAC-TGTTTAGCTCAGTTCTTCGTTTCCGACGGAGAATTGTCATGCC 134036 Query 35643 AGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATA 35700 | | || || ||| |||||| ||| || |||| || || ||||||||||| || Sbjct 134035 AACTTTACCAACGATCAGCGGACATG--GGCCTGGGGGTACCGTTCAATATTGCCAGCTA 133978 Query 35701 CTCTCTTCTGACTCATCTGATGGCC 35725 | | || || || || |||| ||| Sbjct 133977 CGCACTGCTTACGCACATGATTGCC 133953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989543794748305