Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2849 127 2e-24 >seq2849 Length=471161 Score = 127 bits (140), Expect = 2e-24 Identities = 158/215 (73%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || |||||||| || |||| | ||| || || ||||||||||| || || ||||| Sbjct 133939 AGTCCGGTGACGTGGGCAATCATGTGCGTAAGCAGTGCGTAGCTGGCAATATTGAACGGT 133998 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 ||||| ||||||||||| || || | ||||| || ||||| |||| || || | Sbjct 133999 ACCCCCAGGCCCATGTCCGCTGATCGTTGGTAAAGTTGGCATGACAATTCTCCGTCGGAA 134058 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||| | |||||| ||| ||| || || || |||||||| ||| | |||| | ||| Sbjct 134059 ACGAAGAACTGAGCTAAACAGTGGCATGGTGGTAGAGCCATTTGCGGAATGTCCACCGGG 134118 Query 21171 TTCCACGCGCACATAACGATGCGCCGATC-GTGGG 21204 ||||| |||| ||| | ||||| ||||| ||||| Sbjct 134119 TTCCAAGCGCTCATGATAATGCGTCGATCGGTGGG 134153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427759467928080