Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq3028 96.9 2e-15 >seq3028 Length=828553 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/180 (72%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 3866 GAAGGAAAAGGTG-TACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGA 3924 || ||||| || | | || |||||||||| ||||| ||||||||||||||||| || Sbjct 161889 GACGGAAACGGGGGTGCACGTTATGATGGCCGACGGCGGGTTCTCGGTTGAGGGAAGGGA 161948 Query 3925 AAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGAT 3984 ||| ||| ||||| || ||||| || ||||| ||||||| || | || |||| Sbjct 161949 AAACGAGCAGGAAATCTTGTCGAAGCAGTTGTATCTGTGTCAGATATTGGTCGCTTTGAG 162008 Query 3985 GATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAG 4044 ||| | |||| | || || | ||| | || || |||||| | |||||||| ||||| Sbjct 162009 TATCGTCCGAACGGAGGGACACTTTGTAGTGAAGTTGTTCGATCTGTTTACACCGTTTAG 162068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276542912154013