Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3141 150 2e-31 >seq3141 Length=1574671 Score = 150 bits (166), Expect = 2e-31 Identities = 351/524 (67%), Gaps = 4/524 (1%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || |||||| ||||||||||||||| ||||| || ||||| ||| |||||| Sbjct 1346008 GTACTCGCCGACCTTCTTCTCGAAGAAGTTCGTCTTTCCCTCGAGCGAGATGAACTCCAT 1345949 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGTTGGCACCCCAATCTGTTTGAGGAGAC 127349 || || |||||||| | ||| | || | || | |||| || ||||| | Sbjct 1345948 GAAGCTGAACGGGTTCTTGGTGTTGTAGATCTTTTCGTTGCCCAG-CTCGAGCAGGAGGC 1345890 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 |||||| ||| |||| ||||||| |||||| ||| ||||||| |||| |||| Sbjct 1345889 GATCCGCGACAAACTCGATGTACTGCGACATCAGCTCGCAGTTCATGCCGAGCAGGTCGA 1345830 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 || || || | | || |||| ||| ||| ||| | || ||||| || | ||| || Sbjct 1345829 CGGGCAGGGCTTTCGTGAGGAACTCCTGCTCGATGACGACGGCTTCGCGGATGATTTCGA 1345770 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAG-CAAACTCT 127528 | | | || | ||| || || | || | | | |||| |||| || Sbjct 1345769 GCAC-GCGTTCTTTGGAGGGCTTCTGGACCAGGTAGCGGAACATGAGACAGGCAAAGTCG 1345711 Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588 |||||| |||||||| || ||||| || || ||||||||| ||| || |||||||| Sbjct 1345710 GTGTGGAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAGAAGGTCAGGCCGGGCATGAGG 1345651 Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648 || |||||||| | |||||| || | || ||| ||||||||| ||||| || Sbjct 1345650 CCACGCTTCTTGAGCCAGAAGATGGACGCGAAGCTGCCGCTGAAGAAGATGCCCTCGACG 1345591 Query 127649 CACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATC 127708 ||||| || | | |||||| ||||| | | ||| | | ||| |||||| Sbjct 1345590 GCGGCGAAAGCGACCACGCGCTCGCCAAAGTTGGCGTGCTTGCTCGAGATCCAGTTCATC 1345531 Query 127709 GCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 ||||| | |||||||||| | ||| || | |||| |||||| Sbjct 1345530 GCCCAGTCAGCCTTTTTCTTCACACAGGGCAGCGTCTCGATCGC 1345487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613482882108360