Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3071 129 7e-25 >seq3071 Length=929925 Score = 129 bits (142), Expect = 7e-25 Identities = 574/895 (64%), Gaps = 23/895 (3%) Strand=Plus/Minus Query 75704 CTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG--AGGGTGGTCAATGGTCTCTTT 75761 ||||||||||| || || ||||||||||| || |||| | | || | |||| ||| Sbjct 834135 CTGTGGATTCCGGATCTGTTCATGAAGCGAGTCGAGGCTAACGAGGAC--TGGTGTCTGA 834078 Query 75762 TCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCT 75821 | || || || | || || ||| | || | |||||||||||| || || | Sbjct 834077 TGTGCCCGCACGACTGTCCCGGACTCCCGGAAACTTGGGGTGAGGAGTTCGAGAAGCTGT 834018 Query 75822 ACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCG-ATGTTTGG 75880 |||| | ||| || | || || | || | | || | || | | | || | ||| Sbjct 834017 ACACGACGTACGAGAACGAAGGACGCTACATTCGTAAGGT-CAAGGCTCAGGATCTGTGG 833959 Query 75881 AAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCT 75940 || || || | || ||| ||||| ||| || || ||||| |||||||| ||| Sbjct 833958 TTCGCGATCATCGAGTCGCAGGTCGAGACGGGAGTGCCGTACATGCTGTACAAGGACGCT 833899 Query 75941 TGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACG 76000 || ||| |||||| ||||| |||| | || || || ||| | || || ||||||||| Sbjct 833898 TGCAACCGGAAGAGCAACCAGCAGAACATCGGCACCATAAAGTGTTCGAACCTTTGCACG 833839 Query 76001 GAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCC 76060 ||||| | |||||| | ||||| || | || || ||||| ||||| || ||||| Sbjct 833838 GAAATCGTGGAGTACTCGTCCAAGGACGAAATTGCCGTGTGCAACTTGGCCTCGATCGCG 833779 Query 76061 CTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATC 76120 | | || |||||| | ||| | | | ||| | | || || | ||| || Sbjct 833778 GTCAACATGTTTGTCAA--ACCGGACAAG-TCGTATGACTTCCAGAAGCTCAAGGAAGTC 833722 Query 76121 ACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTT--- 76177 | || || || || |||||||| ||| | | || |||| || | || || ||| Sbjct 833721 TCTAAAATAGTCACAAAAAATCTGAACAAAATTATCGACATCAACTACTACCCAGTTCCG 833662 Query 76178 GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTC 76237 ||| | ||| || || ||||| ||| | || || || | ||||| || || | Sbjct 833661 GAGGCCAAGCG---CTCCAACATGCGTCACCGCCCGATCGGAATCGGTGTCCAGGGAATG 833605 Query 76238 GCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAAT 76297 || || | || || || |||| | | | || || |||||| | || |||| Sbjct 833604 GCCGACGCGTTCATCCTGATGCGCTTCCCGTACGAGAGCGAGGAAGCCCAAAAGCTGAAC 833545 Query 76298 GCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAA 76357 | ||||| |||||||| || ||| |||| ||||| || |||||| | || || Sbjct 833544 CAGCAAATCTTCGAAACCATCTACTACGGTGCCCTCGAGGCAAGCTGTGAAATTGCCGAG 833485 Query 76358 GCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGG-GTGCTTCAGTT 76416 | || |||| || || | || || | | ||| | |||||| | || |||| Sbjct 833484 AAGGACGGAACCTACGAAACGTACGATGGCTGT-CCGGTTAGCAAGGGCATCCTGCAGTA 833426 Query 76417 TGATATGTGG--GAAGG-TGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACG 76473 || |||||| |||| | || | || | ||||||| ||||||||| Sbjct 833425 CGACATGTGGAACAAGGCCCCATCCGACCT---GTGGGACTGGGCCCCACTCAAGGAAAA 833369 Query 76474 CATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCAC 76533 ||| || | || | || ||| ||| | | || ||||||||||| || ||||| Sbjct 833368 AATCGCCAAGCACGGAGTCCGAAACTCCCTTCTCCTCGCCCCAATGCCAACCGCGTCCAC 833309 Query 76534 CGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 ||| |||||| | || || || |||| ||| ||||| ||||| | ||| ||||| Sbjct 833308 CGCGCAAATCCTCGGCAACAACGAATCCTTCGAACCGTACACCTCCAACGTCTAC 833254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596545953472480