Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2392 131 5e-25 >seq2392 Length=199072 Score = 131 bits (144), Expect = 5e-25 Identities = 191/265 (72%), Gaps = 10/265 (4%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| ||||||||||| || ||||| ||| | || || ||||| ||| Sbjct 190350 TCCATAGCCTTGATCAAACGACGCTGGATGTAACCGGTTTCGGCAGTCTTGACAGCGGTA 190291 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCC 302692 || || ||||| ||||||| |||||||| |||||| | | ||| || |||| || | Sbjct 190290 TCGATAAGACCTTCACGACCTCCCATAGCGTGGAAGTAGAACTCGGTTGGGGTC--AGTC 190233 Query 302693 CCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGG 302749 | ||| | ||| |||| ||||| || | || ||||| || ||||||| |||| Sbjct 190232 CGGCAAGGTACGAGTTCTCCACGAAGCCTCTCGATTCGGGACCGTAATCGTC---CTTGA 190176 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 | ||||| ||||| || | || | ||| | || |||||||| || |||||||||| Sbjct 190175 TGAAGTGGGGCAGCGTGCGCTTGCGGAACCCGAACGGAATACGCTTACCTTCAACGTTCT 190116 Query 302810 GCTGTCCCAGGCACGAAATCATCTG 302834 | || |||| ||| | ||| | ||| Sbjct 190115 GTTGACCCACGCAAGCAATAACCTG 190091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471757802350627