Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq3077 123 2e-23 >seq3077 Length=956384 Score = 123 bits (136), Expect = 2e-23 Identities = 185/257 (72%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 5340 CTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTC-TTGGCCGA 5398 ||||||||| | |||||| | || ||||| || |||| ||| ||| ||| | || Sbjct 953654 CTCGCAGATAAACTGCGCAATCCGATCGCCGCGGGCCACCTTGAA---CTCGTTGTCGGA 953710 Query 5399 A--GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCC 5456 | |||||| || ||||| |||||||| || || ||||| |||||||||||| || || Sbjct 953711 ATGGTTGAACAGGACCACCCCCAGGTTGCCACGATAGTCCTCGTCCACGACGCCGGCACC 953770 Query 5457 CACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCC 5516 ||||| | ||||| || || || | ||| || | |||||||| ||||||||||| || Sbjct 953771 GACATCGATAAAGTTCTTGACGGCCAAACCCGAGCGGGGCGCCACCCGACCGTAGCAACC 953830 Query 5517 GTATGGCGGGTGGATCTGCAGATCGGTCAGCACTA-CCGCGCGCCCCATCGGCGGCAAGG 5575 | ||| | || | ||| | ||||||| || | | || ||| | | ||| | || Sbjct 953831 CTCCGGCAGCTGAACCTGGATGTCGGTCATAACCAGCTGCTTGCCGC-GGGCCGGAACGG 953889 Query 5576 TGTAGTCGTAAGCGCTG 5592 |||| ||||| |||||| Sbjct 953890 TGTACTCGTAGGCGCTG 953906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447793449883560