Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2849 120 4e-22 >seq2849 Length=471161 Score = 120 bits (132), Expect = 4e-22 Identities = 142/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 146985 AAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGG 147044 ||| ||||| |||||||| | ||||| || ||||| | ||||||||| || ||||| || Sbjct 133938 AAGTCCGGTGACGTGGGCAATCATGTGCGTAAGCAGTGCGTAGCTGGCAATATTGAACGG 133997 Query 147045 GACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGC 147104 |||||||||||||||||| | || | ||||| || ||||| || | || ||||||| Sbjct 133998 TACCCCCAGGCCCATGTCCGCTGATCGTTGGTAAAGTTGGCATGACAATTCTCCGTCGGA 134057 Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 ||| | ||||| || | | |||||| || || || ||||| || | |||| | | Sbjct 134058 AACGAAGAACTGAGCTAAACA-GTGGCATGGTGGTAGAGCCATTTGCGGAATGTCCACCG 134116 Query 147164 GGTTCCAGGC 147173 ||||||| || Sbjct 134117 GGTTCCAAGC 134126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583464871994400