Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2443 98.7 8e-16 >seq2443 Length=228914 Score = 98.7 bits (108), Expect = 8e-16 Identities = 105/136 (77%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 104336 CACATTGCCTAAATCGCCGACGTGACGTTCCGCAGCGTCAGGCGCGCCATGTTG-TTGGT 104394 ||||||||| ||||| ||| ||||||| | | ||||| || ||||| |||| ||| Sbjct 220937 CACATTGCCCAAATCTCCGGCGTGACGGACGGACGCGTCCGGGGCGCCGTGTTCCTTGCC 220878 Query 104395 GTGTGGGGTTAAAGTGCTCGCCTGCCGACGTGCACCCATTGCTAATGTCGCCAAACTCGT 104454 ||| ||| ||||||||| || ||||| |||||||| ||| | ||||||||||||||| Sbjct 220877 GTGCGGG-TTAAAGTGCGGCCCGGCCGAGGTGCACCCGTTGGTGTTGTCGCCAAACTCGT 220819 Query 104455 GCACGTGAAAACCATG 104470 | | ||| || || || Sbjct 220818 GGATGTGGAAGCCGTG 220803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402314051343968