Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2724 120 3e-22 seq3133 114 1e-20 seq3122 107 2e-18 seq3140 105 6e-18 seq3114 95.1 1e-14 >seq2724 Length=367895 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||| ||| | |||| |||||| || ||||||||||| | Sbjct 203037 CCACCACGCAGACGCAGGACCAGATGGAGCGTAGACTCCTTCTGGATGTTGTAATCCGAA 203096 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| |||| |||||| || || || |||| ||||||||||| | || Sbjct 203097 AGGGTGCGGCCGTCCTCCAACTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCTGGCGGG 203156 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | ||||| || || ||| Sbjct 203157 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGACGGCTCGACC 203216 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || ||||| |||||||| || || || || ||||| ||| Sbjct 203217 TCGAGGGTGATGGTCTTACCGGTCAAAGTCTTGACGAAGATTTGCATCCTG 203267 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 |||||||| || | | | ||||| || | || |||||| || |||||||| ||| Sbjct 201666 TTTCCACCGCGAAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 201725 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | || || || |||| || |||||||| || || || |||| ||||||||||| | | Sbjct 201726 GACAGAGTACGACCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGA 201785 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 || | || ||||||||| |||||| ||||| | | | ||||| | || Sbjct 201786 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGAGGGCTCA 201845 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||||||| ||||| || ||||| |||| || |||||||| |||||||||| Sbjct 201846 ACCTCCAAGGTGATGGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCATTC 201897 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||| ||| | |||| |||||| || || ||||| |||| | Sbjct 202581 CCACCACGCAGACGCAGGACCAGATGGAGCGTAGACTCCTTCTGGATATTGTAGTCGGAC 202640 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || |||| ||||||||||| | ||| Sbjct 202641 AGAGTACGACCATCTTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGG 202700 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| |||||| ||| | | | | | ||||| | || ||| Sbjct 202701 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 202760 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| ||||| || || || |||| |||||||| || |||||||||| Sbjct 202761 TCCAGAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATTC 202809 Score = 109 bits (120), Expect = 5e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| | |||||| || | || || |||||||| || || || Sbjct 201933 TCCTTCTGGATGTTGTAATCCGACAAGGTACGACCATCCTCGAGCTGCTTTCCGGCGAAG 201992 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | |||||||| || | || | | |||||||||| |||||| ||| | | | Sbjct 201993 ATAAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTC 202052 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||| ||| || ||| ||||||| || || || ||||| |||| || ||||| Sbjct 202053 TCGATCGTATCGGACGGTTCGACCTCCAGAGTAATGGTCTTACCGGTCAGCGTCTTCACG 202112 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 202113 AAGATCTGCATTC 202125 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| || || | | || |||||| || | || |||||| || ||||||||||| | Sbjct 202807 TTCCTCCGCGGAGACGCAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCG 202866 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 |||||| || |||| |||| |||||| || || || |||| ||||||||||| | | Sbjct 202867 ACAAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGG 202926 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | ||||||||| |||||| ||| | | | | ||||| | || | Sbjct 202927 GAATTCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAGGGCTCGA 202986 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| || || || || || |||| || ||||| || |||||||| Sbjct 202987 CCTCCAAAGTAATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 203035 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| ||| | |||| |||||| || ||||||||||| | | ||| || |||| ||| Sbjct 202143 ACCAGATGGAGCGTAGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCCTCC 202202 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || || || || | |||||||| || | || | | |||||||||| | Sbjct 202203 AACTGCTTTCCGGCGAAGATAAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGG 202262 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | | ||||| | || ||||| | ||||| || ||| Sbjct 202263 ATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTA 202322 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || ||||| || |||||||| Sbjct 202323 CCGGTCAGGGTCTTCACGAAGATCTGCAT 202351 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| ||| | || ||||| || ||||||||||| | Sbjct 202353 CCACCACGCAGACGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCCGAA 202412 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || || ||||| || || || || | |||||||| || | || Sbjct 202413 AGAGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGATCTGGGGGG 202472 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||||| | | | ||| ||| | || ||| Sbjct 202473 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTATCGGAAGGCTCGACC 202532 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || |||| || ||||| || |||||||| Sbjct 202533 TCCAGAGTGATGGTCTTGCCAGTCAGTGTCTTCACGAAGATCTGCAT 202579 >seq3133 Length=1421877 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || ||||| ||| | || |||||| || |||||||| || | Sbjct 291920 CCACCACGCAGGCGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 291861 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || ||||||||||| || || || |||| |||||||| |||| || Sbjct 291860 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCCGGGGGG 291801 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | ||| ||| || || ||| Sbjct 291800 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTATCGGACGGCTCGACC 291741 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || |||||||| | ||||| || || |||||||| ||| Sbjct 291740 TCGAGAGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCCTG 291690 >seq3122 Length=1344033 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| ||| | ||| |||||| || |||||||| || | |||||| || | || ||| Sbjct 596940 ACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAAGGTACGACCATCCTCC 596881 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| || || |||| ||||| || || | ||| | | |||||| ||| | Sbjct 596880 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGGATTCCCTCCTTATCCTGG 596821 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | || | | || || | ||| ||||||| ||||| || ||| Sbjct 596820 ATCTTGGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACCTCCAGGGTGATGGTCTTA 596761 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||||||| || || || || ||||| Sbjct 596760 CCAGTCAAAGTCTTGACGAAGATTTGCAT 596732 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| ||| | ||| |||||| || |||||||| || | |||||| || |||| ||| Sbjct 597852 ACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAAGGTACGACCGTCCTCC 597793 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| || || |||| ||||| || || | ||| | | |||||| ||| | Sbjct 597792 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGGATTCCCTCCTTATCCTGG 597733 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 || || ||| | || | | || || | ||| ||||||| ||||| || || Sbjct 597732 ATTTTGGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACCTCCAGAGTGATGGTCTTG 597673 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||||||| || || || |||||||| Sbjct 597672 CCAGTCAAAGTCTTGACGAAGATCTGCAT 597644 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || |||||||| | || |||||||| || |||||||| || | | Sbjct 595134 CCACCGCGCAGACGCAGTACCAAATGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 595075 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || ||||||||||| || || || |||| ||||| || || | ||| Sbjct 595074 AAGGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGTTGATCTGGAGGG 595015 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG-TTGCCACCGTGTCGCTCGATTCCAC 35688 | | |||||| ||| ||| || |||| | | || | | || || | || || Sbjct 595014 ATTCCCTCCTTATCC-TGAATCTTGGCTTTAACGTTTTCAATGGTATCAGAGGGCTCGAC 594956 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| ||||| || || || |||| ||| ||||| || |||||||| Sbjct 594955 CTCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 594908 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| ||||| ||| |||||| || |||||||| || | | ||| || | || ||| Sbjct 595344 ACCAGATGTAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGACCATCCTCC 595285 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | ||||||||| || || ||||| ||||| || || | ||| | | |||||| ||| | Sbjct 595284 AACTGCTTACCAGCGAAGATCAAACGCTGTTGATCTGGAGGGATTCCCTCCTTATCCTGG 595225 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | | || || | || ||||||| ||||| || || Sbjct 595224 ATCTTGGCCTTAACATTCTCGATGGTATCCGAGGGCTCGACCTCCAAGGTGATGGTCTTG 595165 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||||||| || || ||||||||||| Sbjct 595164 CCAGTCAAAGTCTTGACGAATATCTGCAT 595136 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||||| || |||||| || |||||||| || | |||||| || | || ||| Sbjct 596028 ACCAAATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAAGGTACGACCATCCTCC 595969 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| || || |||| ||||| || || | ||| | | |||||| ||| Sbjct 595968 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGGATTCCCTCCTTATCCTGA 595909 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | || || | ||| ||||||| ||||| || || Sbjct 595908 ATCTTGGCCTTAACGTTCTCGATGGTATCCGAAGGTTCGACCTCCAGGGTGATGGTCTTG 595849 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||| || || || |||||||| Sbjct 595848 CCAGTCAGAGTCTTGACGAAGATCTGCAT 595820 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||| ||| | ||| |||||| || |||||||| || | |||||| || | || ||| Sbjct 597168 ACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGACAAGGTACGACCATCCTCC 597109 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||||||||| || || |||| ||||| || || | || | | |||||| || | Sbjct 597108 AGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTATCTTGG 597049 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | || | | || || | ||| ||||||| ||||| || || Sbjct 597048 ATCTTGGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACCTCCAGAGTGATGGTCTTG 596989 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||| || || || |||||||| Sbjct 596988 CCAGTCAGAGTCTTGACGAAGATCTGCAT 596960 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| |||||||| | || |||||||| || ||||||||||| | || ||| || | || Sbjct 598084 CAATACCAAATGCAGTGTGCTCTCCTTCTGGATGTTGTAATCCGACAGGGTACGACCATC 598025 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || || || |||| ||||| || || | || | | |||||| || Sbjct 598024 CTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTATC 597965 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | ||||| ||| | | | | || || | || ||||||| ||||| || Sbjct 597964 CTGAATCTTGGCCTTAACGTTCTCGATGGTATCCGAGGGCTCGACCTCCAAGGTGATGGT 597905 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| | ||| || || || |||||||| Sbjct 597904 CTTTCCCGTTAGAGTCTTGACGAAGATCTGCAT 597872 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | |||||| || | || |||||||||||||| || || Sbjct 597607 CTCCTTCTGGATGTTGTAGTCCGACAAGGTACGACCATCCTCCAGCTGCTTACCAGCGAA 597548 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||| || || | ||| | | |||||| ||| |||||| ||| | | Sbjct 597547 GATCAGACGCTGTTGATCTGGAGGGATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTT 597488 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || | || ||||| | || || || || || |||||||| || || Sbjct 597487 TTCAATGGTATCCGAGGGCTCGACCTCGAGGGTAATGGTCTTTCCAGTCAAAGTCTTGAC 597428 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 597427 GAAGATCTGCAT 597416 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | |||||| || | || |||||||||||||| || || Sbjct 595555 CTCCTTCTGGATGTTGTAGTCCGACAAGGTACGACCATCCTCCAGCTGCTTACCAGCGAA 595496 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||| || || | |||| | |||||| || |||||| ||| | | Sbjct 595495 AATCAGACGCTGTTGATCTGGGGGAATTCCCTCCTTATCTTGGATCTTGGCCTTAACGTT 595436 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || | || ||||||| || || || || || |||||||| || || Sbjct 595435 CTCGATGGTATCCGAGGGCTCGACCTCCAGGGTAATGGTCTTTCCAGTCAAAGTCTTGAC 595376 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 595375 GAAGATCTGCAT 595364 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 |||||| || | | || ||||| ||| | ||| |||| || | |||||| |||| Sbjct 593310 TCCACCCCGCAGGCGCAGCACCAGATGCAGCGTCGATCCCTTCTGGACGTTGTAGTCGGA 593251 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 ||||| || | || ||||||||||| || || || |||| |||||||| || | || Sbjct 593250 CAAGGCGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCTGGGGG 593191 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| |||||| ||| | | | ||||||| | || || Sbjct 593190 GATACCTTCCTTGTCCTCGATCTTGCCCTTGATGTTCTGGATCGTGTCGACGGGCTCGAC 593131 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || ||||| || || | || ||||| || |||||||| Sbjct 593130 GTCCAGGGTAATGGTTTTCCCGGTGAGGGTCTTCACGAAGATCTGCAT 593083 >seq3140 Length=1521851 Score = 105 bits (116), Expect = 6e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || |||| ||||||||||| || || || Sbjct 429132 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 429191 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| |||||||| || | || | | |||||||||| |||||| || | | | Sbjct 429192 GATCAAACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCTTTGACATT 429251 Query 35665 TGCCACCGTGTCGCTCGAT---TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| |||| || ||||| | ||||| || || ||||||| || || Sbjct 429252 CTCGATCGTGTC---CGATGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTT 429308 Query 35722 CACAAATATCTGCAT 35736 || || |||||||| Sbjct 429309 GACGAAGATCTGCAT 429323 >seq3114 Length=1216407 Score = 95.1 bits (104), Expect = 1e-14 Identities = 197/288 (68%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 44131 TGTGGAACGCTGCCCAAACACAACTGTTGCGAGAAGGTAAAATGCACCAATACATGCGTA 44190 |||||||| | |||||| || || | || || ||||||||| | |||| | Sbjct 661007 TGTGGAACTCGGCCCAACTGCAGATGGTCAAGGAGGGCAAAATGCACGGCTTTCTGCGCA 660948 Query 44191 TGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGC-GCAAACCGCGCTCGTTCAT 44249 |||| ||| |||||||| | || ||| | ||| || | | ||||||| Sbjct 660947 TGTACTGGGCGAAGAAGATCCTCGAATGGACC-AAGTCGCCGGAGGAGGCGCTCGAAACC 660889 Query 44250 GCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTAGGA 44309 || ||||| || |||||| ||| ||||||| || || || ||||| ||||| || Sbjct 660888 GCAATCTACCTCAACGACCGTTACCAGCTGGACGGACGTGATCCGAACGGATACGTCGGC 660829 Query 44310 TGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGGCGTGGCGAGAGCTACCCATCTACGG 44368 ||||||||| ||| ||| ||||||| |||||| ||||| |||| | | ||| Sbjct 660828 TGTATGTGGAGCATCGCCGGCATCCACGATCAGGGC-TGGCGCGAGCGGGAAGTTTTCGG 660770 Query 44369 CAAAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTTGATGT 44416 ||| | ||||||||||||||| | || ||| | ||||||||||| Sbjct 660769 CAAGATTCGCTACATGAACTACGAGGGCTGCAAGCGCAAGTTTGATGT 660722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450775731668680