Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3071 183 3e-41 seq3122 129 5e-25 seq2724 111 1e-19 seq3140 102 7e-17 >seq3071 Length=929925 Score = 183 bits (202), Expect = 3e-41 Identities = 999/1575 (63%), Gaps = 47/1575 (3%) Strand=Plus/Plus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || |||||||| || ||||| ||| ||| || |||||||||| || ||||| || Sbjct 832868 TTGTCCACGGTGAACTGGATGGCGTTGACGGCGGGTTTGGTGCGCAGGTAGTACATTCCG 832927 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTG--GTAATTGG 130523 ||||||||||| || || || || |||||| | | ||||| ||| |||| Sbjct 832928 GTTTTGAGTCCCATCTTCCAGCCGTAGAAGTGGATCGAGGTGA--GTTTGCCGTAGTTGG 832985 Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583 ||| ||| ||| ||||||| ||| || || || || || || ||||||| ||| || | Sbjct 832986 GTTCCGCGACGTGGATGTTGAACGACTGGGACTGGTCGATGAAGGCGCCCCGGTCGGCGG 833045 Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642 |||| | || ||| |||||| || ||||| | || ||||| || || | ||| Sbjct 833046 CCATTTTGATGCA-GGTTTTGACGGAGATTTCCCACACCGTTTTGTAGAGCTCGCGGATG 833104 Query 130643 TGTTTGGGTATGCGCGCAATCGAT----TGAACGCTACCGTTGTTGGCTATAATTTCGTT 130698 || ||||| || || ||||| || | | |||||| |||| || |||| ||| Sbjct 833105 TGCTTGGGGATTT-CG---TCGATGTGCTGGATGGAGCCGTTGCTGGCGATGATTTTGTT 833160 Query 130699 GCGCATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAAT 130758 ||| | || ||| | || | || ||||| | | ||| | || | Sbjct 833161 CTTCATGTCGTCGTCCCACAGCTCGAGTTCGGTGAGGTCTTTGAGGAGATGGTGGTTGAC 833220 Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818 || || || || || | ||| ||||| | ||| | |||| ||| ||||||| || Sbjct 833221 GACCTGGAACTCGCCGGACAGCACGCGCCGGTTGTAGACGTTGGAGGTGTACGGTTCGAA 833280 Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878 ||||||||||||||||| ||||| || || | ||||| ||||| || | | || Sbjct 833281 GGATTCGTTGTTGCCGAGGATTTGCGCGGTGGACGCGGTTGGCATTGGGGCGAGGAGAAG 833340 Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938 || || || | |||||| | | ||||||| ||| | | |||| ||||| || Sbjct 833341 GGAGTTTCGGACTCCGTGCTTGGCGATTTTTTCCTTGAGTGGGGCCCAGTCCCACAGGTC 833400 Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA 130998 || || | | ||||||||||| || | || || ||||| || || | |||| | Sbjct 833401 GGATGG---GGCCTTGTTCCACATGTCGTACTGCAGGATGCCCTTGCTAACCGGACAGCC 833457 Query 130999 TTCGAACGATTCGTAGATTCC-TTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTC 131057 ||| ||| ||||||| |||| | | | || || | || ||| || || | || | Sbjct 833458 ATCGTACGTTTCGTAGGTTCCGTCCTTCTCG-GCAATTTCACAGCTTGCCTCGAGGGCAC 833516 Query 131058 CGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAG 131117 |||| || ||||||||| ||||| | || | | || |||| | ||||||||| | Sbjct 833517 CGTAGTAGATGGTTTCGAAGATTTGCTGGTTCAGCTTTTGGGCTTCCTCGCTCTCGTACG 833576 Query 131118 GAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTAT 131177 | || ||| | || || ||||| || | ||||| | || | || | ||| | | Sbjct 833577 GGAAGCGCATCAGGATGAACGCGTCGGCCATTCCCTGGACACCGATTCCGATCGGGCGGT 833636 Query 131178 GTTTTAAATTACATTTACGC-GAACATTCGG---TGGGATAAAGGTTAATGTCAATTATT 131233 | | || | ||| | | ||| |||| || ||| ||||| || ||| Sbjct 833637 GACGCATGTTGGA---GCGCTTGGCCTCCGGAACTGGG-TAGTAGTTGATGTCGATAATT 833692 Query 131234 TTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTG 131293 ||||| | ||| || |||| | ||| || | || | ||| ||| ||| Sbjct 833693 TTGTTCAGATTTTTTGTGACTATTTTAGAGACTTCCTTGAGCTTCTGGAAGTCATACG-- 833750 Query 131294 CCAGTT-TCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGT 131352 | || || | || ||||| || || || || |||| || || || || | Sbjct 833751 --ACTTGTCCGGTTTGACAAACATGTTGACCGCGATCGAGGCCAAGTTGCACACGGCAAT 833808 Query 131353 TTCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCC 131412 |||||| | | |||| || ||||| | ||| | || | |||||||||||| Sbjct 833809 TTCGTCCTTGGACGAGTACTCCACGATTTCCGTGCAAAGGTTCGAACACTTTATGGTGCC 833868 Query 131413 CAAATTTTGTTGATTGCTTTTAGCATTCACATGGTCCTTGTACATCATGTAGGGCGTGCC 131472 | || || || ||||| || || | ||||||||||| |||||| ||| || Sbjct 833869 GATGTTCTGCTGGTTGCTCTTCCGGTTGCAAGCGTCCTTGTACAGCATGTACGGCACTCC 833928 Query 131473 CGTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATAT 131530 ||| ||||| || | || || | | |||| | || | |||| | | | Sbjct 833929 CGTCTCGACCTGCGACTCGATGA--TCGCGAACCACAGATCCTGAGCCTTGACCTTACGA 833986 Query 131531 TTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAA 131590 |||| | || || ||||| | ||||| | | || || | | || | || Sbjct 833987 ATGTAGCGTCCTTCGTTCTCGTACGTCGTGTACAGCTTCTCGAACTCCT---CACCCCAA 834043 Query 131591 CTGTCC---AAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCA 131647 | ||| | |||||| ||| || ||||| || |||| | |||| || Sbjct 834044 GTTTCCGGGAGTCCGGGACAGTCGTGCGGGCACATCAGACACCAGTCCTCGTTAGCCTCG 834103 Query 131648 ACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTC 131707 ||||||||||| |||| |||||| | ||| | |||||| |||| || | ||| | Sbjct 834104 ACTCGCTTCATGAACAGATCCGGAATCCACAGCGCGTAGAACATGTCCCGAGCGCGGACC 834163 Query 131708 TCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGT 131767 || || | || | |||| ||||| | ||||| || || || || | ||||| ||| Sbjct 834164 TCCTCCTTGCCGGTGTTTTTCTTCAAGTCCAAAAACTCAAAGATATCTCCGTGCCACGGT 834223 Query 131768 TCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACC 131824 |||| ||| | || | || || ||| || ||||| || | ||| | || || Sbjct 834224 TCCAGATAGATCGCAAACGCCCCGGGCCGCTTGTTGCCGCCCTGGTCAACGTACCGCGCC 834283 Query 131825 ATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTA 131884 |||||||||| || | || ||| ||| ||| ||||| | | | || || || | | Sbjct 834284 GTGTTGTTGTAAACCCTCAGCATCGGCACCAGCCCGTTCGAGATCCCGTTCGTTCCGGCA 834343 Query 131885 ATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACC-TCCGCCGTATTT 131943 ||||| |||| || || | ||| ||| || || | || || || |||||| | || Sbjct 834344 ATGTACGTGCCCTTCGCCCGGATGCAGTGCACATTCACACCGATTCCACCCGCCG-ACTT 834402 Query 131944 AGAGATTAGTGCGCA 131958 ||||| | ||||| Sbjct 834403 GGAGATCAACGCGCA 834417 >seq3122 Length=1344033 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||| ||| | ||||| || || || || |||||||| | Sbjct 597186 CCTCCGCGCAGACGCAGAACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 597127 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || ||||| ||||| ||| | || |||||||||||||| || || Sbjct 597126 AAGGTACGACCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGGGGG 597067 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | |||| | || || | || ||| || Sbjct 597066 ATTCCCTCCTTATCTTGGATCTTGGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACC 597007 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || ||||| || | ||||| |||||||| || || ||||| |||||| || Sbjct 597006 TCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATACCT 596956 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||| ||| | ||||| || || || || |||||||| | Sbjct 597870 CCTCCGCGCAGACGCAGGACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 597811 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| || ||||| ||||| ||| | || |||||||||||||| || || Sbjct 597810 AAGGTACGACCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGG 597751 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||| ||| || | | |||| | || || | || ||| || Sbjct 597750 ATTCCCTCCTTATCCTGGATTTTGGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACC 597691 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || ||||| || | ||||| |||| ||| || || ||||| |||||| || Sbjct 597690 TCCAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCATACCT 597640 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||| ||| | ||||| || || || || |||||||| | Sbjct 596958 CCTCCGCGCAGACGCAGAACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 596899 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || ||||| ||||| ||| | || |||||||||||||| || || Sbjct 596898 AAGGTACGACCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGG 596839 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | |||| | || || | || ||| || Sbjct 596838 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACC 596779 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || || || | || || |||| ||| || || |||||||||||| || Sbjct 596778 TCCAGGGTGATGGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCATACCT 596728 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||||||||| || || || || || || |||||||| | Sbjct 596046 CCTCCGCGCAGACGCAGGACCAAATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAC 595987 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || ||||| ||||| ||| | || |||||||||||||| || || Sbjct 595986 AAGGTACGACCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGG 595927 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| || | | | || | || || | | ||| || Sbjct 595926 ATTCCCTCCTTATCCTGAATCTTGGCCTTAACGTTCTCGATGGTATCCGAAGGTTCGACC 595867 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || || || | ||||| |||||||| || || ||||| |||||| || Sbjct 595866 TCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATACCT 595816 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||||||| | || || || || || ||||||||||| Sbjct 597414 CCTCCGCGCAGACGCAGAACCAAATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGAA 597355 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || || | ||| ||||| ||| | || |||||||||||||| || || Sbjct 597354 AGAGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGGGGG 597295 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| || | | |||| | || || | || ||| || Sbjct 597294 ATTCCCTCCTTATCTTGGATCTTTGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACC 597235 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || ||||| || | ||||| |||| ||| ||||| ||||| |||||| || Sbjct 597234 TCCAGAGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCATACCT 597184 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| ||||| ||| | || || || ||||| || |||||||| Sbjct 596274 CCTCCGCGCAGACGCAGTACCAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCCGAA 596215 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || | ||| ||||| ||| | || |||||||||||||| || || Sbjct 596214 AGGGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGG 596155 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | | || | || || | || || || Sbjct 596154 ATTCCCTCCTTATCTTGGATCTTGGCCTTAACGTTCTCGATGGTATCCGAGGGCTCGACC 596095 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || || || | ||||| |||||||| || || ||||| |||||| || Sbjct 596094 TCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATACCT 596044 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| |||| ||||||||| | || || || || || |||||||| | Sbjct 595134 CCACCGCGCAGACGCAGTACCAAATGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 595075 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || ||||| || || ||| | || |||||||||||||| || || Sbjct 595074 AAGGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGTTGATCTGGAGGG 595015 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| ||| | | |||| | || || | || || || Sbjct 595014 ATTCCCTCCTTATCCTGAATCTTGGCTTTAACGTTTTCAATGGTATCAGAGGGCTCGACC 594955 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| |||||||| ||||| ||||| ||||| Sbjct 594954 TCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 594908 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||| ||| | || || || || || || |||||||| | Sbjct 595590 CCTCCGCGCAGACGCAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 595531 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || ||||| ||||| ||| |||| |||||||||||||| || || Sbjct 595530 AAGGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATCAGACGCTGTTGATCTGGGGGA 595471 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | | || | || || | || || || Sbjct 595470 ATTCCCTCCTTATCTTGGATCTTGGCCTTAACGTTCTCGATGGTATCCGAGGGCTCGACC 595411 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || || || | || || |||| ||| || || ||||| |||||| || Sbjct 595410 TCCAGGGTAATGGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCATACCT 595360 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||| ||| | || || || || || || |||||||| Sbjct 595818 CCTCCGCGCAGACGCAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAT 595759 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || | ||| ||||| ||| | || |||||||||||||| || || Sbjct 595758 AAGGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGGGGA 595699 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| || | | |||| | || || | || ||| || Sbjct 595698 ATTCCCTCCTTATCCTGAATCTTGGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACC 595639 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || || || | ||||| |||||||| || || ||||| |||||| || Sbjct 595638 TCCAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATACCT 595588 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||| ||| | || || || || || || |||||||| | Sbjct 596502 CCTCCGCGCAGGCGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 596443 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || ||||| || ||||| | || |||||||||||||| || || Sbjct 596442 AGGGTACGACCATCCTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCTGGAGGG 596383 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | |||| | || || | || ||| || Sbjct 596382 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTTTCAATGGTATCCGAGGGTTCGACC 596323 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || || || | || || |||| ||| || || ||||| |||||| || Sbjct 596322 TCCAGGGTGATGGTCTTACCAGTCAAAGTCTTGACGAAGATCTGCATACCT 596272 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| ||||| ||| | || || || || || || |||||||| | Sbjct 596730 CCTCCGCGCAGACGCAGTACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 596671 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || | ||| ||||| ||| | || |||||||||||||| || || Sbjct 596670 AAGGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGA 596611 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | | || | || || | | ||| || Sbjct 596610 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTCTCAATGGTATCCGAAGGTTCGACC 596551 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | || || | ||||| |||| ||| ||||| ||||| |||||| || Sbjct 596550 TCCAAGGTGATGGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCATACCT 596500 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||| | |||| |||| ||| | || || || || || || |||||||| | Sbjct 597642 CCTCCGCGTAGACGCAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 597583 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || ||||| ||||| ||| | || |||||||||||||| || || Sbjct 597582 AAGGTACGACCATCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGATCTGGAGGG 597523 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | |||| | || || | || || || Sbjct 597522 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACGTTTTCAATGGTATCCGAGGGCTCGACC 597463 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || || || | || || |||| ||| || || ||||| |||||| || Sbjct 597462 TCGAGGGTAATGGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCATACCT 597412 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||||| |||| |||| ||||| ||||| || || || || |||||||| Sbjct 595362 CCTCCGCGCAGACGCAGGACCAGATGTAGTGTAGACTCCTTCTGGATGTTGTAGTCCGAA 595303 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || | ||| ||||| ||| | || | |||||||||||| || || Sbjct 595302 AGGGTACGACCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGATCTGGAGGG 595243 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | || | || || | || || || Sbjct 595242 ATTCCCTCCTTATCCTGGATCTTGGCCTTAACATTCTCGATGGTATCCGAGGGCTCGACC 595183 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | ||||| |||| ||| || || || || |||||| Sbjct 595182 TCCAAGGTGATGGTCTTGCCAGTCAAAGTCTTGACGAATATCTGCATA 595135 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| |||||||||||||| | || || || || || ||||| || | Sbjct 598098 CCTCCCCTCAATCGCAATACCAAATGCAGTGTGCTCTCCTTCTGGATGTTGTAATCCGAC 598039 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || || ||||| || || ||| | || |||||||||||||| || || Sbjct 598038 AGGGTACGACCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGTTGATCTGGGGGG 597979 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| || | | | || | || || | || || || Sbjct 597978 ATTCCCTCCTTATCCTGAATCTTGGCCTTAACGTTCTCGATGGTATCCGAGGGCTCGACC 597919 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | || || | || ||||| ||||| || || ||||| |||||| || Sbjct 597918 TCCAAGGTGATGGTCTTTCCCGTTAGAGTCTTGACGAAGATCTGCATACCT 597868 >seq2724 Length=367895 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| |||| |||| ||| | |||||| || || || |||||||||||| Sbjct 202579 TGCCACCACGCAGACGCAGGACCAGATGGAGCGTAGACTCCTTCTGGATATTGTAGTCGG 202638 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | || | ||||| ||||| || |||||| | || |||||||| || || || | Sbjct 202639 ACAGAGTACGACCATCTTCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAG 202698 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||||| || | | || | ||||| | || || | Sbjct 202699 GGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGA 202758 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || | ||||| ||||| |||||||| ||||| ||||| Sbjct 202759 CCTCCAGAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 202807 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || || ||||| | || | ||||| || | || || || || || || ||||||||| Sbjct 201666 TTTCCACCGCGAAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 201725 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | || |||| |||||||| || || ||| | || |||||||| || || || Sbjct 201726 GACAGAGTACGACCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGA 201785 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | || || || || ||||||| |||| | | || | ||||| | || ||| Sbjct 201786 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGAGGGCTCA 201845 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || | || || | || || ||||| || ||||||||||| ||||| Sbjct 201846 ACCTCCAAGGTGATGGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 201895 Score = 89.7 bits (98), Expect = 4e-13 Identities = 164/239 (69%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| |||| |||| ||| | |||||| || || || || ||||| || Sbjct 203035 TGCCACCACGCAGACGCAGGACCAGATGGAGCGTAGACTCCTTCTGGATGTTGTAATCCG 203094 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| || | ||| || |||||| |||| |||||||| || || |||| Sbjct 203095 AAAGGGTGCGGCCGTCCTCCAACTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCTGGCG 203154 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| || | | || | ||||| | | || | Sbjct 203155 GGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGACGGCTCGA 203214 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAA 27257 | || || || || | || || |||| ||| || || ||||||||||| |||| ||| Sbjct 203215 CCTCGAGGGTGATGGTCTTACCGGTCAAAGTCTTGACGAAGATTTGCAT-CCTGCAAAA 203272 >seq3140 Length=1521851 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | |||| || | || || || || || || ||||||||| | Sbjct 429097 CCACCGCGCAGACGGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAC 429156 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| || ||||| || |||||| | || | |||||| ||||| ||||| Sbjct 429157 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGCGGG 429216 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | ||||| || || ||||||| ||| | | || | ||||| | ||||| | || Sbjct 429217 ATTCCCTCCTTGTCCTGGATCTTGGCTTTGACATTCTCGATCGTGTCCGATGGCT-CGAC 429275 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||||||||| || || || ||||| ||||| Sbjct 429276 CTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 429323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424917977746152