Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3141 113 1e-19 >seq3141 Length=1574671 Score = 113 bits (124), Expect = 1e-19 Identities = 127/169 (75%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | |||||| | |||||||| || | ||||| || | || || |||||||| Sbjct 1345558 CAACTTTGGCGAGCGCGTGGTCGCTTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGCAG 1345617 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 ||| || |||||||||||| | || |||||||| || |||| ||| |||||||| | Sbjct 1345618 CTTC-GCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCGA 1345676 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864 |||| |||||| || |||||||| | || |||||| |||||||| Sbjct 1345677 ACGAGCTGATCTCGCGCGACGAGGGACTCCACACCGACTTTGCCTGTCT 1345725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588271468390095