Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Culex_20quinquefasciatus_20[refseq_20GCF_5F000209185.1_202007-04-23] 3,171 sequences; 579,042,118 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq2724 82.4 5e-11 >seq2724 Length=367895 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || || | ||| || ||||| || | ||||| |||||||| || ||||| Sbjct 203170 GACAAGGAGGGAATCCCGCCAGACCAGCAGCGTCTGATTTTCGCCGGAAAGCAGTTGGAG 203111 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| |||| | | || |||||||||||||| || ||| || | ||| |||| || Sbjct 203110 GACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCTACGCTCCATCTGGTCCTG 203051 Query 28003 CGTTTGCGTGGCGGC 28017 ||| ||||||| ||| Sbjct 203050 CGTCTGCGTGGTGGC 203036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355848647141517