Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq10275 123 2e-23 >seq10275 Length=574352 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| || |||||||| | ||| ||||| ||||| |||||||| | || || || ||| Sbjct 359905 TATTCAGCACCAAAATGTCGCCACTGGAAACCATAGACAGGTCCTAAATCACCCTCCTCT 359964 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 |||||| || ||| |||||| ||| | || |||||| ||||||||||||| Sbjct 359965 CTATCAGTAAATCCACAAGAATCTAAGAAGGCACGTGAACCATTTTCATCCCAAATGTGA 360024 Query 97522 ACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCT 97581 | ||| ||| | |||||| | || |||||| ||||||||||||||| ||| Sbjct 360025 ATACCCTTATCTGTCAATTCTTTGGAATTTGTTGATCCTTTGATAAACCACAACAGTTCC 360084 Query 97582 TCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629 || || || ||| ||| |||||| |||||||| | | |||||| Sbjct 360085 TCAACCACTGCTCGCCAGAATACTTGTTTAGTTGTCAGTAATGGAAAA 360132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346719001733030