Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq10275 122 2e-22 >seq10275 Length=574352 Score = 122 bits (134), Expect = 2e-22 Identities = 189/265 (71%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282 ||||| | || || || || || | |||||| ||| ||| || || ||||| | ||||| Sbjct 360130 TTCCATTACTGACAACTAAACAAGTATTCTGGCGAGCAGTGGTTGAGGAACTGTTGTGGT 360071 Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACG 35342 | |||| || ||| | ||||||||||| | | ||| || ||||| ||| | | Sbjct 360070 TTATCAAAGGATCAACAAATTCCAAAGAATTGACAGATAAGGGTATTCACATTTGGGATG 360011 Query 35343 CTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATAC-GATAGAGCAGAGGGAGAT 35401 ||||| || || | || || || | | || || ||| ||||||| ||||| ||| Sbjct 360010 AAAATGGTTCACGTGCCTTCTTAGATTCTTGTGGATT-TACTGATAGAGAGGAGGGTGAT 359952 Query 35402 TTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA-TGATACCTGTTC 35460 || ||||| || || || ||||| ||||| ||||||||||||||||| || || || | Sbjct 359951 TTAGGACCTGTCTATGGTTTCCAGTGGCGACATTTTGGTGCTGAATACAGAGACATGCAC 359892 Query 35461 TTCCGATTATACTGGAAAGGGTATT 35485 | |||||||| ||| | |||||| Sbjct 359891 -ACAGATTATACAGGACAAGGTATT 359868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989389008966945