Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq10069 232 4e-56
>seq10069
Length=548108
Score = 232 bits (256), Expect = 4e-56
Identities = 378/542 (70%), Gaps = 2/542 (0%)
Strand=Plus/Plus
Query 3604 GAATGATGGATCAAATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTT 3663
||||| || | ||||||||| | || || || || || || |||||||||||||||||
Sbjct 436737 GAATGTTGATCCCAATGAATTGTTGTACTTCGCAGATGTTTGTGCTGGTCCAGGTGGTTT 436796
Query 3664 CAGTGAATATATGTTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACG 3723
|| |||||| | || | |||||||| ||| || |||||| | ||| | || ||
Sbjct 436797 TAGCGAATATGTTTTGTCAAGAAAGAAGTGGCATGCCAAAGGATTTGGATTCACTTTGAA 436856
Query 3724 CGaaaaaaaTGATTTTCAACTGAACAGATTT-TACGATAACTTTTCGGAAACTTTACACC 3782
|| ||||||||||| | || | ||||| | | | | | |||||||| || |
Sbjct 436857 GAAAGAAAATGATTTTAAGTTGGAT-GATTTCTTTGCTGGCCCATGTGAAACTTTTCATC 436915
Query 3783 CGTATTATGGTCCGCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTT 3842
| | ||| ||||| | |||| || | | || |||||||| || | |||
Sbjct 436916 CATTTTACGGTCCCAAAGAAAATGGAGATGTATTTGATGAGCAAAATCAAAAGGAGTTTA 436975
Query 3843 GTGAAATGATTATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTG 3902
| || | |||| | |||| | || ||||| |||||||| |||||| | ||||| |
Sbjct 436976 GATCGTTGGTGATGAGACATACTAATGGTAAAGGCGTACATTTCATGATGTCGGACGGAG 437035
Query 3903 GGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGT 3962
| || || || || |||||||||||||| || || || |||||||| | | ||| | |
Sbjct 437036 GATTTTCAGTGGAAGGTCAAGAAAATATACAGGAGATTTTATCGAAGCAATTATATCTAT 437095
Query 3963 GTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTT 4022
|||| || ||| | || |||||||| | || ||||| |||| ||||| ||| | |
Sbjct 437096 GTCAGTGCTTAGTGGCGTTGATGATAGTGAGACCAGGTGGACATTTTGTTACAAAACTGT 437155
Query 4023 TCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATC 4082
| ||| | |||||||||||||| ||||| | || |||||||||||| | |||| |
Sbjct 437156 TTGATCTGTTTACACCTTTTAGCGCTGGACTTGTTTATTTGATGTATCATTGTTTTGAAA 437215
Query 4083 GTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTTGGTGT 4142
|||||| |||||||| || || | || |||| || ||||| ||| | || ||| | |
Sbjct 437216 GTATTTCAATTTTCAAGCCCAATACTTCCAGACCAGCTAATTCAGAACGTTACTTGATCT 437275
Query 4143 GT 4144
||
Sbjct 437276 GT 437277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276501765126637
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |