Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_006552.1
Length=65195
Score E
Sequences producing significant alignments: (Bits) Value
seq7919 84.2 9e-12
>seq7919
Length=486
Score = 84.2 bits (92), Expect = 9e-12
Identities = 161/237 (68%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 11263 GCCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCG 11322
||| ||||| ||||| ||| ||||| |||||||||| | ||||| ||| ||| |
Sbjct 138 GCCCTCGATATAGACTTGGCGACCCTTGCGCAGGTATTCGCCGGCGATATCGCCCAACTT 197
Query 11323 GCCAAAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTC 11382
||| ||||| |||||||||||| ||||| ||||| | | |||| | ||
Sbjct 198 GCCCCAGAGCTTGACCCGGTGCCATTCGGTCTTTTCCTGGGGATTGCCG---TCACGATC 254
Query 11383 TTTCCAGCTTTCGCTAGTGGCCAGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGA 11442
||||||| | |||| |||| || | || || || | || |||||| | || |
Sbjct 255 TTTCCAGGCGCGGGTAGTCGCCAAGCTTAAGGTGGCGATGGTCTGTCCGCCTTGAGTGTA 314
Query 11443 TCTTGCGTCTGGATCCTGGCCCAGATGGCCGACCAGGATTACCTTGTTCACTCCGCG 11499
| | || || || | ||| || | |||| ||||||| || ||||| || |||||
Sbjct 315 CTTCACCTCCGGGTCGTTGCCGAGGTTGCCGGCCAGGATCACTTTGTTTACGCCGCG 371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 208460120669164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |