Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq7919 84.2 9e-12 >seq7919 Length=486 Score = 84.2 bits (92), Expect = 9e-12 Identities = 161/237 (68%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 11263 GCCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCG 11322 ||| ||||| ||||| ||| ||||| |||||||||| | ||||| ||| ||| | Sbjct 138 GCCCTCGATATAGACTTGGCGACCCTTGCGCAGGTATTCGCCGGCGATATCGCCCAACTT 197 Query 11323 GCCAAAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTC 11382 ||| ||||| |||||||||||| ||||| ||||| | | |||| | || Sbjct 198 GCCCCAGAGCTTGACCCGGTGCCATTCGGTCTTTTCCTGGGGATTGCCG---TCACGATC 254 Query 11383 TTTCCAGCTTTCGCTAGTGGCCAGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGA 11442 ||||||| | |||| |||| || | || || || | || |||||| | || | Sbjct 255 TTTCCAGGCGCGGGTAGTCGCCAAGCTTAAGGTGGCGATGGTCTGTCCGCCTTGAGTGTA 314 Query 11443 TCTTGCGTCTGGATCCTGGCCCAGATGGCCGACCAGGATTACCTTGTTCACTCCGCG 11499 | | || || || | ||| || | |||| ||||||| || ||||| || ||||| Sbjct 315 CTTCACCTCCGGGTCGTTGCCGAGGTTGCCGGCCAGGATCACTTTGTTTACGCCGCG 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208460120669164