Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq10371 100 3e-16 >seq10371 Length=124667 Score = 100 bits (110), Expect = 3e-16 Identities = 212/313 (68%), Gaps = 5/313 (2%) Strand=Plus/Plus Query 110164 GTTTCTACG---GGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTC 110220 |||||| || || |||||||| ||||||||| || ||||| || || | Sbjct 63173 GTTTCTTCGATAGGATAAAAGTTAACGTCGATGACTTTATCTAGATTACGAGTAACGATT 63232 Query 110221 TTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTG 110280 |||| || | | ||||| || ||||||| |||||||| || |||| ||| | || Sbjct 63233 TTCGCGACTGTTTTAAGTTTATCAAAATCGAAAGTTTTCGTGTCTGTATTAACAAACATG 63292 Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTC-GGTGTATTCCAA 110339 || ||| ||||| || | ||| ||||||| | || || | | || |||||| | Sbjct 63293 TTGACAGCGATAGATGCTAAATTACACACAGC-GACTTCTCCAGGACCGGAGTATTCAAC 63351 Query 110340 AATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGA 110399 |||||| || ||||||||| | || || || | | || ||||||||||| Sbjct 63352 AATTTCGGTGCACAAGTTGCTGCATTTGATAGTGCCTATATGCTGATGATTCGATTTTCG 63411 Query 110400 GTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAAT 110459 ||||| ||| ||||| ||||| || || || || ||||| || ||| ||||||| Sbjct 63412 ATTGCAATGATCTTTATAAAGCATATAAGGTGTTCCGGTTTCTACTTGAGACCTGAGAAT 63471 Query 110460 GGCCTTCCATACA 110472 ||| ||||||| Sbjct 63472 GGCGAGCCATACA 63484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588862776726200