Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq10371 82.4 9e-11
>seq10371
Length=124667
Score = 82.4 bits (90), Expect = 9e-11
Identities = 224/338 (66%), Gaps = 4/338 (1%)
Strand=Plus/Plus
Query 106303 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCT 106362
||||||||||||||||| |||||| || || || | |||||||| ||
Sbjct 63139 ACCAATAGGTCTGTGTCTACGATTAGATGTTTTCGTTTCTTCGATAGGATAAAAGTTAAC 63198
Query 106363 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 106422
||| |||||| | |||||| ||||| || || | || | | |||||| ||| |
Sbjct 63199 GTCGATGACTTTATCTAGATTACGAGTAACGATTTTCGCGACTGTTTTAAGTTTATCAAA 63258
Query 106423 ATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCA 106482
||| ||||| || ||| ||| ||| || | | ||||| ||||| ||||| ||
Sbjct 63259 ATCGAAAGTTTTCGTGTCTGTATTAACAAACATGTTGACAGCGATAGATGCTAAATTACA 63318
Query 106483 AACAGCCGTCTCATCC-TTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCT 106541
|||| || || ||| | | | ||| || | |||||| || ||||||||| | |
Sbjct 63319 CACAG-CGACTTCTCCAGGACCGGAGTATTCAACAATTTCGGTGCACAAGTTGCTGCATT 63377
Query 106542 TAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG-TTGCACGCATCCTTGTAGAGCATG 106600
| || || || | || || || || | |||| | ||||| ||| || || |||||
Sbjct 63378 TGATAGTGCCTATATGCTGATGATT-CGATTTTCGATTGCAATGATCTTTATAAAGCATA 63436
Query 106601 TAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGC 106638
|| || || || || || || ||| ||||||| ||
Sbjct 63437 TAAGGTGTTCCGGTTTCTACTTGAGACCTGAGAATGGC 63474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589867383565960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |