Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq15109 125 8e-24
>seq15109
Length=3572570
Score = 125 bits (138), Expect = 8e-24
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597
||||| ||| | ||||| || |||||||| || |||| || || ||| || |||||
Sbjct 2013308 CTGTCGTGTCTGATGATCACGTATCCATCGACGAATGGAGTGTTCGAAGAAACGATCAGT 2013367
Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657
| ||||| || || || || | ||||||||||||||| | || ||||| ||| |
Sbjct 2013368 GATATATGCAACATGGTGCACAACGTTGGTGGTCAGGTATACTTGGACGGTGCCAATATG 2013427
Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717
||||| || || || | ||| |||| |||||| || || | ||||| ||
Sbjct 2013428 AATGCTCAAGTTGGCTTGTGTCGACCCGGTGATTATGGTAGCGACGTGTCGCATCTCAAT 2013487
Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777
||||||| || || |||||||| ||||||||||| || ||||| | |||||||| ||
Sbjct 2013488 CTACATAAAACGTTTTGTATTCCTCATGGAGGTGGCGGACCTGGTATGGGTCCTATCGGA 2013547
Query 159778 GT 159779
||
Sbjct 2013548 GT 2013549
Score = 105 bits (116), Expect = 8e-18
Identities = 201/294 (68%), Gaps = 4/294 (1%)
Strand=Plus/Plus
Query 158430 TGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATT 158489
||| |||| | ||| | ||||| | ||| | ||||| || || |||||||||| ||
Sbjct 2012035 TGTTGGTACGAGCCAACGTTTTGGGGTGCCTCTTGGATATGGTGGACCTCATGCTGGGTT 2012094
Query 158490 CTTTGCAA--CAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCA 158547
||||||| | ||||| | | || || | || |||||||| ||||| |
Sbjct 2012095 CTTTGCATGCCGACAGAAATTGGTGCGATTAA--TGCCCGGCAGAATGATAGGTGTTACG 2012152
Query 158548 GTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATC 158607
|||| | | || | | || || | ||||| || || || | ||||| || |||
Sbjct 2012153 AGAGATTTCAACGGACAGGACGCTTATCGTTTAGCCCTCCAAACGCGCGAGCAACACATC 2012212
Query 158608 AGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCT 158667
|| ||||| ||||| ||||| || || || || ||||||||| |||| ||||||||||||
Sbjct 2012213 AGGAGAGATAAAGCCACCAGCAATATTTGTACCGCACAAGCATTGCTCGCTAATATGTCT 2012272
Query 158668 GGGTTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGCAAGAAGA 158721
| | ||||| | |||||| || | | ||| ||| | ||| || || |||
Sbjct 2012273 GCAATGTATGCGGTATATCACGGACCTCAAGGAATACGAGATATCGCGAGCAGA 2012326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587938154507440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |