Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq10275 113 6e-20 >seq10275 Length=574352 Score = 113 bits (124), Expect = 6e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 104867 GAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTGTT 104926 ||| | || ||| | || ||||| | ||||||||| || || | || | ||| || Sbjct 360083 GAACTGTTGTGGTTTATCAAAGGATCAACAAATTCCAAAGAATTGACAGATAAGGGTATT 360024 Query 104927 AAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTT-TCG 104985 | | ||| |||| |||||||||||| || |||||||||||||||||| ||| | | Sbjct 360023 CACATTTGGGATGAAAATGGTTCACGTGCCTTCTTAGATTCTTGTGGATTT-ACTGATAG 359965 Query 104986 AAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATA 105045 | | || |||||||||||||| | ||||| || || ||| ||||| ||| ||| |||| Sbjct 359964 AGAGGAGGGTGATTTAGGACCTGTCTATGGTTTCCAGTGGCGACATTTTGGTGCTGAATA 359905 Query 105046 TATCGACTGTGATACCGACTATACCGGCCAAGGTAT 105081 | ||| | || || ||||| || |||||||| Sbjct 359904 CAGAGACATGCACACAGATTATACAGGACAAGGTAT 359869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658276630214840