Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq10440 170 2e-36 seq10535 147 2e-29 seq15293 138 9e-27 seq9764 118 9e-21 seq9994 95.1 1e-13 seq10177 87.8 1e-11 >seq10440 Length=2225863 Score = 170 bits (188), Expect = 2e-36 Identities = 543/828 (66%), Gaps = 22/828 (3%) Strand=Plus/Minus Query 551755 TCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAG 551814 |||| |||||| ||||| ||| | | || || || | ||||| |||||||| | Sbjct 2123105 TCGAGGATGGTATCTTTGAGGTAAAATCCACGGCCGGCGACACGCATCTCGGTGGCGAGG 2123046 Query 551815 ATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGT 551872 | ||||| || || |||| | || |||| |||| ||||| | ||| |||| Sbjct 2123045 ACTTTGACAACCGAATGGTGAACCACTTTGTGC--AAGAATTTAAGAGGAAATACAAGAA 2122988 Query 551873 TGATCT-ATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCA 551931 ||||| | | || | | |||||| | ||||| || ||||||||||| ||||| | Sbjct 2122987 AGATCTGAGCAGCAACAAG-AGAGCTCTGAGACGTCTGAGGACTGCTTGCGAGAGAGCGA 2122929 Query 551932 AACGAGCTCTTTCATCTGGT--ACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGG 551989 | ||| | || | || | || || | | || ||| | |||||||| |||||||| Sbjct 2122928 A--GAGAACATTGAGCTCATCAACGCAGGCGAGCATCGAAATCGATTCATTGTTTGAGGG 2122871 Query 551990 AATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTT 552049 ||||| | ||||| | | | || |||| ||| || || | || | ||||| || Sbjct 2122870 CATTGACTTCTATACGTCGGTAACTAGAGCCAGATTCGAGGAGCTCTGCGCCGATCTGTT 2122811 Query 552050 TAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAA 552109 ||||| || ||||||| || ||| | | | ||||| | ||||| |||||| || | Sbjct 2122810 TAGAAGCACTCTTGAACCCGTGGAAAAGGCGCTTAGAGACGCGAAGATGGATAAAGCCCA 2122751 Query 552110 AGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAA---AT 552166 ||| || || || || || ||||| || || || || || ||||||| ||| | Sbjct 2122750 AGTTCACAGCATCGTTCTAGTCGGTGGCTCCACCAGGATACCAAAAATTC-AGAAGCTAC 2122692 Query 552167 GTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGT 552226 | ||| | || ||| || || || || | ||| || | ||||| || ||||| || Sbjct 2122691 TTCAAGAT-TTCTTT-AACGGCAAGGAACTGAATAAATCCATCAATCCGGACGAGGCCGT 2122634 Query 552227 TGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG--GACAA-ACTGATGAAAAACT 552283 ||| |||||||| ||| |||| || || ||||| | ||||| | || | || | Sbjct 2122633 TGCTTATGGTGCGGCAGTTCAGGCGGCCATTCTGCACGGCGACAAGTCCGAGG---AAGT 2122577 Query 552284 ACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGG 552343 ||| || | | || | || || ||||| | || | ||| | ||||| | ||| || Sbjct 2122576 CCAAGATCTACTTCTACTGGACGTGACTCCGTTGTCATTGGGTATTGAAACCGCTGGCGG 2122517 Query 552344 TATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATT 552403 ||||||||| | || | || || || || || || ||| | | | || Sbjct 2122516 CGTTATGACTACCTTGATTAAGAGGAACACGACGATACCAACGAAACAGACCCAGACGTT 2122457 Query 552404 TTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAA 552463 | ||||| || || |||||| | | || || || | | || ||||| ||| Sbjct 2122456 CACCACGTACTCCGACAATCAACCGGGAGTGCTTATACAGGTCTACGAGGGAGAGAGAGC 2122397 Query 552464 ATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCC 552523 | || || |||||||| || || | ||| | | ||||||||||| || || Sbjct 2122396 GATGACGAAGGATAATAACATCCTCGGCAAATTTGAGCTGACGGGTATTCCTCCAGCGCC 2122337 Query 552524 TCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571 ||| || || |||||||| ||||| ||||| |||||||| || ||||| Sbjct 2122336 TCGAGGTGTTCCGCAAATCGAAGTCACTTTTGATATCGACGCTAATGG 2122289 >seq10535 Length=209863 Score = 147 bits (162), Expect = 2e-29 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 |||||||||||| |||| || |||| | | | ||| | | |||| || || Sbjct 206855 ATGAAAATGAAAGAAACTGCTGCAGCTTATTTAAATACTCCAGTAAAGAATGCTGTTATT 206796 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||||||||| ||||||||||| |||||||| ||||| || || |||||||| | ||| Sbjct 206795 ACTGTACCAGCGTATTTTAATGATTCACAACGACAAGCGACAAAGGATGCTGGTCAGATT 206736 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || ||| | ||||| |||||| | || ||||| || ||||| ||||||||||| |||||| Sbjct 206735 GCAGGATTGAATGTGCTTCGTGTAATTAATGAGCCAACTGCAGCTGCACTTGCTTATGGA 206676 Query 550529 CTTGATAAACA 550539 | |||||||| Sbjct 206675 ATGGATAAACA 206665 >seq15293 Length=768699 Score = 138 bits (152), Expect = 9e-27 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || |||||||| ||||| ||| |||||| ||||||||| || | | ||| Sbjct 125708 CTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGACAAAGTC 125767 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||| || || ||||| || || ||||| |||||||| ||||| |||||||| ||| Sbjct 125768 CGTCCATCCTCCAGCTGTTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCT 125827 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAG 563432 ||||||||||||||||| ||| || ||| || || |||| | || || | Sbjct 125828 TCTTTATCTTGAATTTTCGCTTTCACGTTCTCGATCGTGTCAGACGCTTCGAC-CTCCAA 125886 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | |||||||||||| ||||| || |||||||| |||||| Sbjct 125887 TGTGATAGTTTTACCAGTGAGAGTCTTGACGAAAATCTGCATA 125929 Score = 116 bits (128), Expect = 3e-20 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330 ||| |||||| ||| || ||| || ||||||| || || | |||||||| || Sbjct 125953 ATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTGCGGCCGTCTTCAAGCTG 126012 Query 563331 TTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 |||||||||||| || | ||| |||||||| ||||| ||||||||||| || |||||||| Sbjct 126013 TTTTCCGGCAAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCCTGAATTTT 126072 Query 563391 TTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAG 563449 ||| || ||||| || || | || || ||| ||||| | ||||| || | Sbjct 126073 AGCTTTCACGTTTTCAATCGTGTCCGATGCTTCGAC-TTCCAGAGTGATTGTTTTGCCGG 126131 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 | || ||||| || |||||||||||| Sbjct 126132 TGAGTGTTTTGACAAAAATTTGCATA 126157 Score = 116 bits (128), Expect = 3e-20 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGA 563318 |||||| || | ||| | ||| ||| || || ||||| |||| || || | Sbjct 126169 ACGGAGAACCAAATGCAATGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCC 126228 Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||||| ||||||||||| ||||| | ||| |||||||| ||||| ||||||||||| Sbjct 126229 GTCTTCAAGCTGTTTTCCGGCGAAAATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTT 126288 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAA 563437 ||||||||||| ||| || ||||| || || | || | | ||| ||||| | Sbjct 126289 GTCTTGAATTTTAGCTTTCACGTTTTCAATCGTGTC-GGATGCCTCAACTTCCAGAGTGA 126347 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || ||||| || |||||||||||| Sbjct 126348 TTGTTTTGCCGGTGAGCGTTTTGACAAAAATTTGCATA 126385 Score = 114 bits (126), Expect = 1e-19 Identities = 121/157 (77%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 |||||||| ||||||||||| ||||| | ||| |||||||| ||||| ||||||||||| Sbjct 126458 TCTTCAAGCTGTTTTCCGGCGAAAATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTTG 126517 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAAC 563438 ||||||||||| ||| || ||||| || || | || | | ||| ||||| | Sbjct 126518 TCTTGAATTTTAGCTTTCACGTTTTCAATCGTGTC-GGATGCCTCAACTTCCAGAGTGAT 126576 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || ||||| || |||||||||||| Sbjct 126577 TGTTTTGCCGGTGAGCGTTTTGACAAAAATTTGCATA 126613 Score = 114 bits (126), Expect = 1e-19 Identities = 121/157 (77%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 |||||||| ||||||||||| ||||| | ||| |||||||| ||||| ||||||||||| Sbjct 126686 TCTTCAAGCTGTTTTCCGGCGAAAATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTTG 126745 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAAC 563438 ||||||||||| ||| || ||||| || || | || | | ||| ||||| | Sbjct 126746 TCTTGAATTTTAGCTTTCACGTTTTCAATCGTGTC-GGATGCCTCAACTTCCAGAGTGAT 126804 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || ||||| || |||||||||||| Sbjct 126805 TGTTTTGCCGGTGAGCGTTTTGACAAAAATTTGCATA 126841 Score = 104 bits (114), Expect = 2e-16 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 |||||||| ||||||||||| ||||| | ||| |||||||| ||||| |||||||| || Sbjct 126914 TCTTCAAGCTGTTTTCCGGCGAAAATTAATCTCTGCTGATCTGGAGGGATTCCTTCCTTG 126973 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAAC 563438 |||||||||||| ||| || || || ||||| | || | | ||| | || | Sbjct 126974 TCTTGAATTTTTGCTTTGACATTTTCGATCGTATCTG-ATGCCTCAACTTCCAACGTGAT 127032 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||| || || || ||||| || || |||||||| Sbjct 127033 AGTTTTTCCCGTCAGGGTTTTGACAAAGATTTGCAT 127068 Score = 104 bits (114), Expect = 2e-16 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||| | ||| |||||| ||| || ||||||| ||||| | Sbjct 127307 AGACGAAGAACCAAATGTAAGGTTGATTCTTTTTGAATGTTATAATCAGAGAGAGTACGA 127366 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||||| |||||||| || || | | ||||||||||| || || ||||| Sbjct 127367 CCGTCTTCAAGTTGCTTTCCGGCGAAGATCAAACGCTGCTGATCAGGTGGGATGCCTTCC 127426 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 |||||||| || ||| |||||| |||||| ||||||| | || ||| ||||| Sbjct 127427 TTATCTTGGATCTTTGCTTTTACGTTCTCAATGGTATCAGAAGCCTCGAC-TTCCAGAGT 127485 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || | || || |||||||| ||||| Sbjct 127486 TATGGTCTTCCCGGTCAACGTCTTCACGAAAATCTGCAT 127524 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||| | ||| |||||| ||| || ||||||| ||||| | Sbjct 127079 AGACGAAGAACCAAATGTAAGGTCGATTCTTTTTGAATGTTATAATCAGAGAGAGTACGG 127138 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||||| |||||||| || || | | ||||||||||| || || ||||| Sbjct 127139 CCGTCTTCAAGTTGCTTTCCGGCGAAGATCAAACGCTGCTGATCAGGTGGGATGCCTTCC 127198 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 || || |||||||| ||| || || || ||||| | || | | ||| | || Sbjct 127199 TTGTCCTGAATTTTGGCTTTGACGTTTTCGATCGTATCTG-ATGCCTCAACTTCCAACGT 127257 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||||| || || || ||||| || || |||||||| Sbjct 127258 GATAGTTTTTCCCGTCAGGGTTTTGACAAAGATTTGCAT 127296 >seq9764 Length=1320143 Score = 118 bits (130), Expect = 9e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| || |||||| ||| |||||||| | || ||||| Sbjct 200092 AGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTTCTA 200033 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || || || || || || || | | ||| |||||||||||||| |||||| Sbjct 200032 CCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCT 199973 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 |||||||| || || ||| || || |||||||||| | | ||| || || Sbjct 199972 TTATCTTGGATCTTGGCTTTCACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGGGTG 199913 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| |||||||| ||||| || ||||| Sbjct 199912 ATGGTTTTCCCAGTGAGAGTTTTTACGAAGATCTGCAT 199875 Score = 118 bits (130), Expect = 9e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| || |||||| ||| |||||||| | || ||||| Sbjct 200776 AGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTTCTA 200717 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || || || || || || || | | ||| |||||||||||||| |||||| Sbjct 200716 CCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCT 200657 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 |||||||| || || ||| || || |||||||||| | | ||| || || Sbjct 200656 TTATCTTGGATCTTGGCTTTCACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGGGTG 200597 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| |||||||| ||||| || ||||| Sbjct 200596 ATGGTTTTCCCAGTGAGAGTTTTTACGAAGATCTGCAT 200559 Score = 114 bits (126), Expect = 1e-19 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| || |||||| ||| |||||||| | || ||||| Sbjct 200548 AGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTTCTA 200489 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || || || || || || || | | ||| |||||||||||||| |||||| Sbjct 200488 CCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCT 200429 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||| || || || || || |||||||||| | | |||||| || Sbjct 200428 TTGTCTTGGATCTTGGCCTTCACATTTTCTATTGTATCAGAGGCTTCAACTTCGAGGGTG 200369 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| |||||||| || || |||||||| Sbjct 200368 ATGGTTTTCCCAGTGAGAGTTTTCACAAAGATTTGCAT 200331 Score = 113 bits (124), Expect = 4e-19 Identities = 141/190 (74%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||||| |||||||| ||||| ||||| || || || || || Sbjct 201201 TTTGG--ATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGAT 201144 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | | ||| ||||| ||||| ||||| ||||| || |||||||| ||||| || Sbjct 201143 TAAACGTTGTTGATCTGGAGGGATTCCCTCTTTGTCCTGAATTTTGGCCTTTACGTTTTC 201084 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | | | | |||||| || | |||||||||||||||||||| |||| Sbjct 201083 AATGGTGTCTGAA-GCTTCGACTTCGAGGGTGATGGTTTTACCAGTAAGAGTTTTCACGA 201025 Query 563465 AAATTTGCAT 563474 |||||||||| Sbjct 201024 AAATTTGCAT 201015 Score = 109 bits (120), Expect = 4e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| || |||||| ||| |||||||| | || ||||| Sbjct 199864 AGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTTCTA 199805 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| | || || || || || || | | ||| |||||||||||||| |||||| Sbjct 199804 CCGTCTTCCAACTGCTTACCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCT 199745 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 |||||||| || || ||| || ||| || ||||||| | | || || | || Sbjct 199744 TTATCTTGGATCTTGGCTTTGACATTCTCTATAGTATCAG-AAGCTTCCACCTCTAAGGT 199686 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| |||||||||||||| || || |||||||| Sbjct 199685 GATGGTTTTCCCAGTAAGAGTTTTCACAAAGATTTGCAT 199647 Score = 100 bits (110), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||||| ||| |||||| ||||||||| || | || || || Sbjct 200320 AGACGCAGAACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAGTCTGAGAGTGTCCTA 200261 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| | || || || || || || | | ||| |||||||||||||| |||||| Sbjct 200260 CCGTCTTCCAACTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCT 200201 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||| || || ||||| || ||||| |||| | | |||||| || Sbjct 200200 TTGTCTTGGATCTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTG 200141 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| |||||||| ||||| || ||||| Sbjct 200140 ATGGTTTTCCCAGTGAGAGTTTTCACGAAGATCTGCAT 200103 Score = 96.9 bits (106), Expect = 3e-14 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| ||||| ||| |||||| ||||||||| || | || || || ||||| | Sbjct 200993 CAAG-TGAAGAGTAGATTCTTTCTGAATATTGTAGTCTGAGAGTGTCCTACCGTCTTCCA 200935 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 || || || || || || | | ||| |||||||||||||| |||||||| ||||| | Sbjct 200934 ACTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCTTTGTCTTGGA 200875 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTAC 563446 | || ||||| || ||||| |||| | | |||||| || | ||||| | Sbjct 200874 TCTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTCC 200815 Query 563447 CAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| |||||||| ||||| || ||||| Sbjct 200814 CAGTGAGAGTTTTCACGAAGATCTGCAT 200787 >seq9994 Length=6265506 Score = 95.1 bits (104), Expect = 1e-13 Identities = 120/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 930666 GATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATT 930725 ||||||||| || || |||||||| ||||||||| | ||||| || | ||||| || Sbjct 975705 GATTTTTCTAGTCCTAACATTGCCAAGGAAATGCATGTCGGACACTTAAGATCTACGATA 975764 Query 930726 ATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTC--A 930783 |||||||| | | | || || | ||||| | ||| | | || || ||| | | Sbjct 975765 ATTGGAGACAGTATCTCAAGGTTGTTAGAATACTTAGGACATGATGT--ATTGAGACTTA 975822 Query 930784 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 930826 ||||| | ||||||||||| ||||||||||||||||| || || Sbjct 975823 ATCATGTAGGTGATTGGGGTACACAATTTGGTATGTTGATAGC 975865 >seq10177 Length=3058365 Score = 87.8 bits (96), Expect = 1e-11 Identities = 141/198 (71%), Gaps = 5/198 (3%) Strand=Plus/Plus Query 563278 GTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCG 563337 |||| || |||| |||||||||||| | ||||| | | ||| || || ||||| || Sbjct 2346109 GTACCTT-TTTG--AATATTGTAATCGGACAGAGTACGTCCATCCTCCAGCTGTTTGCCA 2346165 Query 563338 GCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTT 563397 || || || |||| || ||||| || ||||||||||| || || || || || || Sbjct 2346166 GCGAAGATGAGTCGCTGTTGATCTGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTG 2346225 Query 563398 ACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGT 563456 || ||| || ||||| | | ||| ||||| || | |||||||| || || || Sbjct 2346226 ACATTCTCGATGGTATCGGAAGCCTCTAC-CTCGAGGGTGATGGTTTTACCCGTGAGGGT 2346284 Query 563457 TTTAACGAAAATTTGCAT 563474 ||| |||||||| ||||| Sbjct 2346285 TTTCACGAAAATCTGCAT 2346302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028482689120710