Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq10826 102 2e-16 >seq10826 Length=1073184 Score = 102 bits (112), Expect = 2e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||||| ||| || || ||||| |||| | |||||| || || |||||||| ||||| Sbjct 361581 CTTGAGCAGCTTGACCTTGTCCTCGAGCCTGGAGATGCGCTCGAGCTTGCGCCGTCGGCA 361522 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| || |||| |||||||| | | ||| | ||| |||||| ||||||| Sbjct 361521 CTTGGACGCGGCCACGCGGTTCCTCTGCCGCTTCCTCTCCAGCTTGATCTTCTCCTGGTT 361462 Query 241609 CTCCATGTCGATCGGAGAC 241627 ||||||||||||||| ||| Sbjct 361461 CTCCATGTCGATCGGCGAC 361443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931353724463360