Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_020205.1
Length=42963
Score E
Sequences producing significant alignments: (Bits) Value
seq7919 109 2e-19
>seq7919
Length=486
Score = 109 bits (120), Expect = 2e-19
Identities = 205/295 (69%), Gaps = 10/295 (3%)
Strand=Plus/Plus
Query 34842 CCAGCATCTTCATCTGATCGCAGGCGATGTCGGTGGTGTAGTGCGTCACGCCTTCCTTTT 34901
||| ||||| ||||| |||| |||| ||||| ||||||||| | | || |||||||
Sbjct 56 CCAACATCTGCATCTCATCGGCAACGATATCGGTCGTGTAGTGCTTGATACCATCCTTTT 115
Query 34902 CGTACTTGCCGTAACGGATCATGCCCGCCACCGCGATCTTCGA-ACCCTTGCGCAAGTAT 34960
|||| ||||| ||| |||| | | || ||| | ||||||||||| ||||
Sbjct 116 CGTAAGAACCGTATTCAATCCGGCCCTCGATATAGA-CTTGGCGACCCTTGCGCAGGTAT 174
Query 34961 TCGCCGGCAATCTCGGCCAGCTTCCCGAAGAACACCACCCGGTGCCACTGGGTTTCTTCG 35020
|||||||| || ||| ||| ||| || ||| | ||||||||||| | ||| | ||
Sbjct 175 TCGCCGGCGATATCGCCCAACTTGCCCCAGAGCTTGACCCGGTGCCATTCGGTCTTTT-- 232
Query 35021 ACCTGG---TTGCCCTCGCGGTCTTTCC-GCTTCGACGTGGTGGCGATGGAAATGCGGGT 35076
||||| ||||| || || ||||||| | || || || || | | | | ||
Sbjct 233 -CCTGGGGATTGCCGTCACGATCTTTCCAGGCGCG-GGTAGTCGCCAAGCTTAAGGTGGC 290
Query 35077 GATGGCCATGCCGCCCTGCGTGTAAGTCACCTTCGGGTCATCCCCCAGGTTCCCG 35131
||||| | ||||| || ||||| |||||| |||||| | || ||||| |||
Sbjct 291 GATGGTCTGTCCGCCTTGAGTGTACTTCACCTCCGGGTCGTTGCCGAGGTTGCCG 345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137334914544150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |