Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq15109 134 2e-26 >seq15109 Length=3572570 Score = 134 bits (148), Expect = 2e-26 Identities = 175/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || |||||||| | ||||| || ||||||||||| |||||||| || || |||||| Sbjct 2013549 ACTCCGATAGGACCCATACCAGGTCCGCCACCTCCATGAGGAATACAAAACGTTTTATGT 2013490 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | || || |||||| |||| ||| | || || || ||| Sbjct 2013489 AGATTGAGATGCGACACGTCGCTACCATAATCACCGGGTCGACACAAGCCAACTTGAGCA 2013430 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| ||||| || | ||||||||||||||| || || || || || ||||| Sbjct 2013429 TTCATATTGGCACCGTCCAAGTATACCTGACCACCAACGTTGTGCACCATGTTGCATATA 2013370 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | ||||| || ||| || || |||| ||||||||||| || ||||| | ||| || Sbjct 2013369 TCACTGATCGTTTCTTCGAACACTCCATTCGTCGATGGATACGTGATCATCAGACACGAC 2013310 Query 138423 AG 138424 || Sbjct 2013309 AG 2013308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578887094795080