Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq15293 111 1e-19
seq9764 98.7 6e-16
seq10177 82.4 5e-11
>seq15293
Length=768699
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| || ||||||||||| || || || | || | || || ||||||||||||||||||
Sbjct 127106 TCTTTTTGAATGTTATAATCAGAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCGGCGAAG 127165
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || ||||| || | || | || |||||||| | ||||| ||||||| |
Sbjct 127166 ATCAAACGCTGCTGATCAGGTGGGATGCCTTCCTTGTCCTGAATTTTGGCTTTGACGTTT 127225
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || ||||| || || | || || || |||||||| ||||| || |||
Sbjct 127226 TCGATCGTATCTGATGCCTCAACTTCCAACGTGATAGTTTTTCCCGTCAGGGTTTTGACA 127285
Query 34967 AAGATCTGCAT 34977
||||| |||||
Sbjct 127286 AAGATTTGCAT 127296
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||| ||||| ||||| || || |||| | || || || || |||||||||||
Sbjct 126878 TCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCGTCTTCAAGCTGTTTTCCGGCGAAA 126937
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| | || ||||| ||| | || | || |||||||| | |||||| |||||| |
Sbjct 126938 ATTAATCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTTGCTTTGACATTT 126997
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || ||||| || || | || || || |||||||| ||||| || |||
Sbjct 126998 TCGATCGTATCTGATGCCTCAACTTCCAACGTGATAGTTTTTCCCGTCAGGGTTTTGACA 127057
Query 34967 AAGATCTGCAT 34977
||||| |||||
Sbjct 127058 AAGATTTGCAT 127068
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| || ||||||||||| || || || | || | || || ||||||||||||||||||
Sbjct 127334 TCTTTTTGAATGTTATAATCAGAGAGAGTACGACCGTCTTCAAGTTGCTTTCCGGCGAAG 127393
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || ||||| || | || | || ||||| || | || ||| ||| |||
Sbjct 127394 ATCAAACGCTGCTGATCAGGTGGGATGCCTTCCTTATCTTGGATCTTTGCTTTTACGTTC 127453
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| |||||||| || | ||||||||||| || || | ||||| ||
Sbjct 127454 TCAATGGTATCAGAAGCCTCGACTTCCAGAGTTATGGTCTTCCCGGTCAACGTCTTCACG 127513
Query 34967 AAGATCTGCATG 34978
|| |||||||||
Sbjct 127514 AAAATCTGCATG 127525
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||||||||||||||| || || || |||| | || || || || |||||||| |||
Sbjct 125966 TCCTTCTGAATGTTATAATCAGAAAGCGTGCGGCCGTCTTCAAGCTGTTTTCCGGCAAAG 126025
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| || ||||| ||| | || | || || ||||| | ||||| ||| ||| |
Sbjct 126026 ATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCCTGAATTTTAGCTTTCACGTTT 126085
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || || ||||| || | || || || || || ||||| || || |||
Sbjct 126086 TCAATCGTGTCCGATGCTTCGACTTCCAGAGTGATTGTTTTGCCGGTGAGTGTTTTGACA 126145
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 126146 AAAATTTGCAT 126156
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||| ||||| ||||| || || |||| | || || || || |||||||||||
Sbjct 126194 TCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCGTCTTCAAGCTGTTTTCCGGCGAAA 126253
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| | || ||||| ||| | || | || || ||||| | ||||| ||| ||| |
Sbjct 126254 ATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTAGCTTTCACGTTT 126313
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || ||||| || || | || || || || || ||||| || || |||
Sbjct 126314 TCAATCGTGTCGGATGCCTCAACTTCCAGAGTGATTGTTTTGCCGGTGAGCGTTTTGACA 126373
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 126374 AAAATTTGCAT 126384
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||| ||||| ||||| || || |||| | || || || || |||||||||||
Sbjct 126422 TCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCGTCTTCAAGCTGTTTTCCGGCGAAA 126481
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| | || ||||| ||| | || | || || ||||| | ||||| ||| ||| |
Sbjct 126482 ATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTAGCTTTCACGTTT 126541
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || ||||| || || | || || || || || ||||| || || |||
Sbjct 126542 TCAATCGTGTCGGATGCCTCAACTTCCAGAGTGATTGTTTTGCCGGTGAGCGTTTTGACA 126601
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 126602 AAAATTTGCAT 126612
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||| ||||| ||||| || || |||| | || || || || |||||||||||
Sbjct 126650 TCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCGTCTTCAAGCTGTTTTCCGGCGAAA 126709
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| | || ||||| ||| | || | || || ||||| | ||||| ||| ||| |
Sbjct 126710 ATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGAATTTTAGCTTTCACGTTT 126769
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| |||| || ||||| || || | || || || || || ||||| || || |||
Sbjct 126770 TCAATCGTGTCGGATGCCTCAACTTCCAGAGTGATTGTTTTGCCGGTGAGCGTTTTGACA 126829
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 126830 AAAATTTGCAT 126840
>seq9764
Length=1320143
Score = 98.7 bits (108), Expect = 6e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
||||||| | | | ||| ||||| |||| ||| || || |||||||| || || |
Sbjct 200103 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGG 200044
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| || | | | || ||||| ||||| || |||||||||| ||||| || || | |
Sbjct 200043 AGAGTGTTCTACCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAG 199984
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | || || || || | || || ||| ||| | |||| | ||| ||| || |
Sbjct 199983 GAATGCCTTCTTTATCTTGGATCTTGGCTTTCACGTTTTCTATTGTATCAGAGGCTTCAA 199924
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| |||| ||| ||||| || || ||||| || ||||| |||||||||||
Sbjct 199923 CTTCAAGGGTGATGGTTTTCCCAGTGAGAGTTTTTACGAAGATCTGCAT 199875
Score = 98.7 bits (108), Expect = 6e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
||||||| | | | ||| ||||| |||| ||| || || |||||||| || || |
Sbjct 200787 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGG 200728
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| || | | | || ||||| ||||| || |||||||||| ||||| || || | |
Sbjct 200727 AGAGTGTTCTACCGTCTTCCAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAG 200668
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | || || || || | || || ||| ||| | |||| | ||| ||| || |
Sbjct 200667 GAATGCCTTCTTTATCTTGGATCTTGGCTTTCACGTTTTCTATTGTATCAGAGGCTTCAA 200608
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| |||| ||| ||||| || || ||||| || ||||| |||||||||||
Sbjct 200607 CTTCAAGGGTGATGGTTTTCCCAGTGAGAGTTTTTACGAAGATCTGCAT 200559
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
||||||| | | | ||| |||| ||||| || || |||||||| || ||||| |
Sbjct 200331 TTCCTCCTCGAAGACGCAGAACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAGTCTG 200272
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| || | | | || |||| ||||| || |||||||||| ||||| || || | |
Sbjct 200271 AGAGTGTCCTACCGTCTTCCAACTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAG 200212
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | || || ||||| | || || || ||| | |||| | ||| ||| || |
Sbjct 200211 GAATGCCTTCTTTGTCTTGGATCTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 200152
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | ||| ||||| || || ||||| || || || |||||||||||
Sbjct 200151 CTTCGAGGGTGATGGTTTTCCCAGTGAGAGTTTTCACGAAGATCTGCAT 200103
>seq10177
Length=3058365
Score = 82.4 bits (90), Expect = 5e-11
Identities = 134/191 (70%), Gaps = 4/191 (2%)
Strand=Plus/Plus
Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849
|| ||||| || || || || || | || |||| ||||| || || || ||||||||
Sbjct 2346115 TTTTGAATATTGTAATCGGACAGAGTACGTCCATCCTCCAGCTGTTTGCCAGCGAAGATG 2346174
Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909
||||| || || ||| | || | || |||||||| | || || ||||| || ||
Sbjct 2346175 AGTCGCTGTTGATCTGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCT 2346232
Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
|| | || ||||| || || | ||| ||||| || ||||||||||| || || |
Sbjct 2346233 CGATGGTATCGGAAGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 2346292
Query 34968 AGATCTGCATG 34978
| |||||||||
Sbjct 2346293 AAATCTGCATG 2346303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325631754889601
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