Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq10275 131 2e-25 >seq10275 Length=574352 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 168528 GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 168587 ||||| || ||| |||| ||||| ||||| |||| ||| |||| | |||| ||| || Sbjct 360083 GAACTGTTGTGGTTTATCAAAGGATCAACAAATTCCAAAGAATTGACAGATAAGGGTATT 360024 Query 168588 AAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGA 168647 | ||||| | || |||||||| |||| || ||||||| ||||| ||||| || ||| Sbjct 360023 CACATTTGGGATGAAAATGGTTCACGTGCCTTCTTAGATTCTTGTGGATTTACTGATAGA 359964 Query 168648 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 168707 | || ||||||||||| || | ||||| || || ||| ||||| || ||| |||| Sbjct 359963 GAGGAGGGTGATTTAGGACCTGTCTATGGTTTCCAGTGGCGACATTTTGGTGCTGAATAC 359904 Query 168708 ATTGACTGTGATACAGATTACACCGGACAAGG 168739 | ||| | |||||||| || |||||||| Sbjct 359903 AGAGACATGCACACAGATTATACAGGACAAGG 359872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635055495046120