Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq10275 100 4e-16 >seq10275 Length=574352 Score = 100 bits (110), Expect = 4e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 180428 GAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATATTGGTGTT 180487 ||| | || ||| | || ||||| | ||||||||| || || | |||| ||| || Sbjct 360083 GAACTGTTGTGGTTTATCAAAGGATCAACAAATTCCAAAGAATTGACAGATAAGGGTATT 360024 Query 180488 AAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTCGA 180547 | | ||| |||| |||||||| ||| || |||||||||||||||||| | | || Sbjct 360023 CACATTTGGGATGAAAATGGTTCACGTGCCTTCTTAGATTCTTGTGGATTTACTGATAGA 359964 Query 180548 AAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 180607 | || |||||||||||||| | ||||| || || ||| ||||| || ||| |||| Sbjct 359963 GAGGAGGGTGATTTAGGACCTGTCTATGGTTTCCAGTGGCGACATTTTGGTGCTGAATAC 359904 Query 180608 ATTGACTGTGATACCAACTATATCGGGCAAGGTAT 180642 | ||| | || | |||| || |||||||| Sbjct 359903 AGAGACATGCACACAGATTATACAGGACAAGGTAT 359869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655154030611000