Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq10275 100 4e-16
>seq10275
Length=574352
Score = 100 bits (110), Expect = 4e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 180428 GAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATATTGGTGTT 180487
||| | || ||| | || ||||| | ||||||||| || || | |||| ||| ||
Sbjct 360083 GAACTGTTGTGGTTTATCAAAGGATCAACAAATTCCAAAGAATTGACAGATAAGGGTATT 360024
Query 180488 AAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTCGA 180547
| | ||| |||| |||||||| ||| || |||||||||||||||||| | | ||
Sbjct 360023 CACATTTGGGATGAAAATGGTTCACGTGCCTTCTTAGATTCTTGTGGATTTACTGATAGA 359964
Query 180548 AAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 180607
| || |||||||||||||| | ||||| || || ||| ||||| || ||| ||||
Sbjct 359963 GAGGAGGGTGATTTAGGACCTGTCTATGGTTTCCAGTGGCGACATTTTGGTGCTGAATAC 359904
Query 180608 ATTGACTGTGATACCAACTATATCGGGCAAGGTAT 180642
| ||| | || | |||| || ||||||||
Sbjct 359903 AGAGACATGCACACAGATTATACAGGACAAGGTAT 359869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655154030611000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |