Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_026596.1 Length=57052 Score E Sequences producing significant alignments: (Bits) Value seq14041 84.2 8e-12 >seq14041 Length=20782 Score = 84.2 bits (92), Expect = 8e-12 Identities = 106/145 (73%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 44861 TGTGGGAGACGGGGCAGATGGACCTGTTCTCCGGGCACTCGGTGCCGTACTCGGAGACCT 44920 ||||||||||| |||| ||||| ||| |||| ||||| ||||| ||||| || || Sbjct 20300 TGTGGGAGACGATGCAGCCTGACCTCTTC---GGGCGCTCGGCGCCGTTCTCGGCGATCT 20356 Query 44921 TGCCGACCTCGGGTATGACGCGCAGTGGATCACTCTTGCCGCTTCCGACGTCGGCGCACC 44980 |||||| |||||||||||||| | |||||| || |||| ||| | ||| || || Sbjct 20357 GGCCGACATCGGGTATGACGCGGAATGGATCGGCCTACCCGCATCCCTGGCCGGGGCGCC 20416 Query 44981 GCACCGGCGTGAACGCGTCTTCATC 45005 || | || ||| |||||||| Sbjct 20417 TCATCATCGGTTCCGCATCTTCATC 20441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182411480904372